RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ARSGQ96EG1 525 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SENP5Q96HI0 755 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR7D2Q96RA2 312 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF649Q9BS31 505 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMED9Q9BVK6 235 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRRG3Q9BZD7 231 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC22A4Q9H015 551 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 NT5DC2Q9H857 520 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 PAQR5Q9NXK6 330 aaPredicted RBP6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 LIPT1Q9Y234 373 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ATG2BQ96BY7 2078 aa6.5□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZC3H12DA2A288 527 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 HMX3A6NHT5 357 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CD8B2A6NJW9 211 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 MID1O15344 667 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 HRO43593 1189 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FCMRO60667 390 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 GUCY1B2O75343 617 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CD8BP10966 210 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF24P17028 368 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FUT1P19526 365 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 HIST1H1TP22492 207 aaPredicted RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 S100A1P23297 94 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 MYL9P24844 172 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PKLRP30613 574 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 GABRA5P31644 462 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CDH11P55287 796 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRMT2P55345 433 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRPS15P82914 257 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CD83Q01151 205 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRDX1Q06830 199 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FGL2Q14314 439 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CDK10Q15131 360 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 IRF4Q15306 451 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZIC1Q15915 447 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF311Q5JNZ3 666 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 C1orf53Q5VUE5 145 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CNIH2Q6PI25 160 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CD200R1LQ6Q8B3 271 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM111BQ6SJ93 734 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PAMR1Q6UXH9 720 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM64Q6YI46 380 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 VASH1Q7L8A9 365 aaPredicted RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SIRT6Q8N6T7 355 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ARIH2OSQ8N7S6 290 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ACOT4Q8N9L9 421 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 LILRB4Q8NHJ6 448 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SPPL3Q8TCT6 385 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 UBASH3BQ8TF42 649 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 KAT2AQ92830 837 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CAMK1GQ96NX5 476 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FCRL4Q96PJ5 515 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SNX18Q96RF0 628 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ARHGDIGQ99819 225 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ARHGAP9Q9BRR9 750 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PINK1Q9BXM7 581 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 HDHD5Q9BXW7 423 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 RNF32Q9H0A6 362 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 TBC1D17Q9HA65 648 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRSS16Q9NQE7 514 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRDM7Q9NQW5 492 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRPS18AQ9NVS2 196 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SPHK1Q9NYA1 384 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 DEC1Q9P2X7 70 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 APOBEC3BQ9UH17 382 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CES1P1Q9UKY3 287 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 C2orf92A0A1B0GVN3 265 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ANKRD34BA5PLL1 514 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM172BPA6NC97 362 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CCDC182A6NF36 153 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM183AA6NL82 134 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SOCS6O14544 535 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CDC42EP2O14613 210 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC30A4O14863 429 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CASC3O15234 703 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SURF4O15260 269 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SEC14L5O43304 696 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FGBP02675 491 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 RPN2P04844 631 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 F3P13726 295 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 DRD2P14416 443 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ATP5A1P25705 553 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SOX9P48436 509 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 RAB28P51157 221 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PDX1P52945 283 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 TSPAN31Q12999 210 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 DUSP6Q16828 381 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM214AQ32MH5 1076 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 KLHL22Q53GT1 634 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM78AQ5JUQ0 283 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PDZK1Q5T2W1 519 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 AGBL4Q5VU57 503 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 AADACL4Q5VUY2 407 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ABHD17CQ6PCB6 329 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 NR2C2APQ86WQ0 139 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 REM2Q8IYK8 340 aaPredicted RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ASCC1Q8N9N2 400 aaKnown RBP6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 POGLUT1Q8NBL1 392 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms