RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PADI2Q9Y2J8 665 aa16.33■□□□□ 0.2
PSEN1-206ENST00000553447 WDR45Q9Y484 360 aa16.33■□□□□ 0.2
PSEN1-206ENST00000553447 DTNAQ9Y4J8 743 aa16.33■□□□□ 0.2
PSEN1-206ENST00000553447 FRYLO94915 3013 aa16.33■□□□□ 0.2
PSEN1-206ENST00000553447 C9orf172C9J069 976 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 BRINP1O60477 761 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 FCMRO60667 390 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 STX11O75558 287 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 DLGAP3O95886 979 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 ALPPP05187 535 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 FESP07332 822 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 TNFRSF1BP20333 461 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 TRHRP34981 398 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-206ENST00000553447 NCF4Q15080 339 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 IQCCQ4KMZ1 466 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 TMEM205Q6UW68 189 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 OR1N1Q8NGS0 311 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 EME1Q96AY2 570 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 VPS50Q96JG6 964 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 PHOX2BQ99453 314 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 SAP130Q9H0E3 1048 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 MTHFD2LQ9H903 347 aaPredicted RBP16.32■□□□□ 0.2
PSEN1-206ENST00000553447 NTN4Q9HB63 628 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 THSD1Q9NS62 852 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 ABCG2Q9UNQ0 655 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 CFL2Q9Y281 166 aa16.32■□□□□ 0.2
PSEN1-206ENST00000553447 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 PRAMEF25A6NGN4 478 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 SAGE2PA6NJ88 616 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 SAC3D1A6NKF1 404 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 KCNK2O95069 426 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 GUSBP08236 651 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 PABPC4LP0CB38 370 aaKnown RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 CT45A8P0DMV1 189 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 CT45A9P0DMV2 189 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 CYP27C1Q4G0S4 372 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 CT45A2Q5DJT8 189 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 C3orf38Q5JPI3 329 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 FIGNL1Q6PIW4 674 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 C6orf15Q6UXA7 325 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 TSEN54Q7Z6J9 526 aaKnown RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 HMGN2P46Q86SG4 172 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 KBTBD2Q8IY47 623 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 CACTIN-AS1Q8N1I8 211 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 APOBEC4Q8WW27 367 aaKnown RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 PROX1Q92786 737 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 RMND5BQ96G75 393 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF354BQ96LW1 612 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 BTBD9Q96Q07 612 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 CIB1Q99828 191 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 PINK1Q9BXM7 581 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 SPRY4Q9C004 299 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 QRSL1Q9H0R6 528 aaKnown RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 TRIM45Q9H8W5 580 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 Q9N2J8 555 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 COPS7AQ9UBW8 275 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 C19orf25Q9UFG5 118 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 MKLN1Q9UL63 735 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 GPR55Q9Y2T6 319 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-206ENST00000553447 SH3GLB1Q9Y371 365 aa16.31■□□□□ 0.2
PSEN1-206ENST00000553447 SDK2Q58EX2 2172 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 IGHV3-20A0A0C4DH32 117 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 OR6C76A6NM76 312 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 GNGT2O14610 69 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 KIAA0513O60268 411 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 OR1E2P47887 323 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 KCNC4Q03721 635 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 PUM1Q14671 1186 aaKnown RBP eCLIP16.3■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF311Q5JNZ3 666 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 TMEM164Q5U3C3 297 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 AP1ARQ63HQ0 302 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 OR2T5Q6IEZ7 315 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 IZUMO2Q6UXV1 221 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 CPEB2Q7Z5Q1 589 aaKnown RBP16.3■□□□□ 0.2
PSEN1-206ENST00000553447 EPHX4Q8IUS5 362 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 NFAM1Q8NET5 270 aaPredicted RBP16.3■□□□□ 0.2
PSEN1-206ENST00000553447 OR4N2Q8NGD1 307 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 OR2T29Q8NH02 315 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 PMM1Q92871 262 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 TMBIM1Q969X1 311 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 ZG16BQ96DA0 208 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 C9orf16Q9BUW7 83 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 COQ10BQ9H8M1 238 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 CACYBPQ9HB71 228 aaKnown RBP16.3■□□□□ 0.2
PSEN1-206ENST00000553447 FBXO34Q9NWN3 711 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 NDUFAF4Q9P032 175 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 PADI1Q9ULC6 663 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 OAZ3Q9UMX2 235 aa16.3■□□□□ 0.2
PSEN1-206ENST00000553447 PTRH2Q9Y3E5 179 aaKnown RBP16.3■□□□□ 0.2
PSEN1-206ENST00000553447 PTPRBP23467 1997 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 TM4SF5O14894 197 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 DIRAS1O95057 198 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 CD63P08962 238 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 CCNYL3P0C7X3 344 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 ITGA2P17301 1181 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 RPS4Y1P22090 263 aaKnown RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 PRKAR1BP31321 381 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 PIGAP37287 484 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms