RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 TMEM91Q6ZNR0 172 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 KLBQ86Z14 1044 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 GHDCQ8N2G8 530 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PIGXQ8TBF5 258 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 OSTF1Q92882 214 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 NUS1Q96E22 293 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 SECISBP2Q96T21 854 aaKnown RBP16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PRR14Q9BWN1 585 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 OR52A5Q9H2C5 316 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 KCNN2Q9H2S1 579 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PIGUQ9H490 435 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 WASH6PQ9NQA3 447 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PTGFRNQ9P2B2 879 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 ING4Q9UNL4 249 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 GPR34Q9UPC5 381 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
SYNE3-202ENST00000553340 H7BY64 318 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 SURF4O15260 269 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 FABP7O15540 132 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 TSC22D2O75157 780 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 RFPL3O75679 317 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PAPLNO95428 1278 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 IGHA1P01876 353 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 GNSP15586 552 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 TRIM23P36406 574 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 FUT5Q11128 374 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 ANKRD54Q6NXT1 300 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 OR8H1Q8NGG4 311 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PHF21AQ96BD5 680 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 PRAP1Q96NZ9 151 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 ZNF649Q9BS31 505 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 MED28Q9H204 178 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 SLC35C2Q9NQQ7 365 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 MRPL39Q9NYK5 338 aaKnown RBP16.47■□□□□ 0.23
SYNE3-202ENST00000553340 SRRDQ9UH36 339 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 CBLCQ9ULV8 474 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 LIPT1Q9Y234 373 aa16.47■□□□□ 0.23
SYNE3-202ENST00000553340 KIAA1549LQ6ZVL6 1849 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 DRD2P14416 443 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 NTSP30990 170 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 OMPP47874 163 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 REEP5Q00765 189 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 ST3GAL3Q11203 375 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 LASP1Q14847 261 aaKnown RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 NDUFAF5Q5TEU4 345 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 FAM205BPQ63HN1 556 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 VASNQ6EMK4 673 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 BHLHB9Q6PI77 547 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 ZNF322Q6U7Q0 402 aaPredicted RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 ASB18Q6ZVZ8 466 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 LRRC28Q86X40 367 aaPredicted RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 LRRC17Q8N6Y2 441 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 AMER3Q8N944 861 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 OR4Q3Q8NH05 313 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 RFT1Q96AA3 541 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 BBS4Q96RK4 519 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 THAP7Q9BT49 309 aaPredicted RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 DPH7Q9BTV6 452 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 QRSL1Q9H0R6 528 aaKnown RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 DDX31Q9H8H2 851 aaKnown RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 MED17Q9NVC6 651 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 H2AFY2Q9P0M6 372 aaPredicted RBP16.46■□□□□ 0.23
SYNE3-202ENST00000553340 SATB2Q9UPW6 733 aa16.46■□□□□ 0.23
SYNE3-202ENST00000553340 A0A0A6YYJ9 748 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 A0A0G2JN53 185 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 PRR23AA6NEV1 266 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 CPSF4LA6NMK7 179 aaKnown RBP16.46■□□□□ 0.22
SYNE3-202ENST00000553340 LEUTXA8MZ59 168 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 DHFRP00374 187 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 C8AP07357 584 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 HTR1FP30939 366 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 TRA2BP62995 288 aaKnown RBP16.46■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF311Q5JNZ3 666 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 ZBTB37Q5TC79 503 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 FAM46CQ5VWP2 391 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 UBE3DQ7Z6J8 389 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 KIAA0907Q7Z7F0 614 aaPredicted RBP16.46■□□□□ 0.22
SYNE3-202ENST00000553340 OR5M3Q8NGP4 307 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 TFGQ92734 400 aaPredicted RBP16.46■□□□□ 0.22
SYNE3-202ENST00000553340 DHRS9Q9BPW9 319 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 ABCG5Q9H222 651 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 CYSLTR2Q9NS75 346 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 TNFRSF10DQ9UBN6 386 aa16.46■□□□□ 0.22
SYNE3-202ENST00000553340 GTPBP1O00178 669 aaKnown RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 CHP2O43745 196 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 OR1F1O43749 312 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 LZTS3O60299 673 aaPredicted RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 PQBP1O60828 265 aaKnown RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 RGS9O75916 674 aaPredicted RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 PAHP00439 452 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 HMGN2P05204 90 aaKnown RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 WEE1P30291 646 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 MTNR1BP49286 362 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 TAS2R38P59533 333 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 SP3Q02447 781 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 ARHGAP19Q14CB8 494 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 PLA1AQ53H76 456 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF697Q5TEC3 545 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms