RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 POU4F3Q15319 338 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 C8orf74Q6P047 294 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 CLEC9AQ6UXN8 241 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 LARP4Q71RC2 724 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCH1-221ENST00000550914 CHMP1BQ7LBR1 199 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
PTCH1-221ENST00000550914 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 PFDN4Q9NQP4 134 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF226Q9NYT6 803 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 TAS2R9Q9NYW1 312 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 HEY2Q9UBP5 337 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF180Q9UJW8 692 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF225Q9UK10 706 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 NFU1Q9UMS0 254 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 A8MT66 165 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 MANBAO00462 879 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 PPP6CO00743 305 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SMPD2O60906 423 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SLITRK5O94991 958 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 ESRRBO95718 433 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 MPIP34949 423 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 CPOXP36551 454 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 HSD17B3P37058 310 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 CD79BP40259 229 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 CDH13P55290 713 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 CORO7P57737 925 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 B3GALT5-AS1P59052 145 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 OCRLQ01968 901 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 CLCQ05315 142 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 FGFBP1Q14512 234 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 GANABQ14697 944 aaKnown RBP11.62□□□□□ -0.55
PTCH1-221ENST00000550914 HEPACAMQ14CZ8 416 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SPIN4Q56A73 249 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 FAM180BQ6P0A1 224 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 GALNT18Q6P9A2 607 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 NPSR1Q6W5P4 371 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 RPS27LQ71UM5 84 aaKnown RBP11.62□□□□□ -0.55
PTCH1-221ENST00000550914 P4HA3Q7Z4N8 544 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 P3H2Q8IVL5 708 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 TMEM151AQ8N4L1 468 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 OR4K17Q8NGC6 315 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 ARSGQ96EG1 525 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 WFIKKN1Q96NZ8 548 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF382Q96SR6 550 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 PAFAH2Q99487 392 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SMR3AQ99954 134 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 FOLH1BQ9HBA9 442 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 SLC35C2Q9NQQ7 365 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 GIMAP4Q9NUV9 329 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 ELOVL5Q9NYP7 299 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 ABCG2Q9UNQ0 655 aa11.62□□□□□ -0.55
PTCH1-221ENST00000550914 MXRA5Q9NR99 2828 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 GNG14A0A1W2PPG7 69 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 B4DXG7 233 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 EMC8O43402 210 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 PCDH7O60245 1069 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 ULK1O75385 1050 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 OR4F21O95013 312 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 IL3P08700 152 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 SBK3P0C264 359 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 FPR1P21462 350 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 CRYGSP22914 178 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 CKAP4Q07065 602 aaKnown RBP11.61□□□□□ -0.55
PTCH1-221ENST00000550914 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 CYP27C1Q4G0S4 372 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 Q5PR19 223 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 OR5M10Q6IEU7 315 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 LCA5Q86VQ0 697 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 FAM9CQ8IZT9 166 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 CDYL2Q8N8U2 506 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 OR9A2Q8NGT5 310 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 KAT2AQ92830 837 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 MTBPQ96DY7 904 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 C11orf24Q96F05 449 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-221ENST00000550914 PGM2Q96G03 612 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 COX4I2Q96KJ9 171 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 HBEGFQ99075 208 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 CDC42EP4Q9H3Q1 356 aaKnown RBP11.61□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF395Q9H8N7 513 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-221ENST00000550914 ANKRA2Q9H9E1 313 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 SDHAF3Q9NRP4 125 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 SIRT5Q9NXA8 310 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 PPP4R1LQ9P1A2 415 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 STK38LQ9Y2H1 464 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF175Q9Y473 711 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 OR10H1Q9Y4A9 318 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
PTCH1-221ENST00000550914 A0A087WV62 115 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms