RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ZNF655Q8N720 491 aaPredicted RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 BMPERQ8N8U9 685 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 FBXO15Q8NCQ5 510 aaPredicted RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 BBS1Q8NFJ9 593 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 MARVELD3Q96A59 401 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 RFT1Q96AA3 541 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 CHFRQ96EP1 664 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 SLC38A2Q96QD8 506 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 SECISBP2Q96T21 854 aaKnown RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 THAP7Q9BT49 309 aaPredicted RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 ZFR2Q9UPR6 939 aaKnown RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 INSL5Q9Y5Q6 135 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 FAM170BA6NMN3 283 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 I3L521 148 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 EIF4EP06730 217 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF250P15622 560 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 GSTM3P21266 225 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 SDHBP21912 280 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 CFL1P23528 166 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 MAPK9P45984 424 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF658BQ4V348 819 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 GAREM2Q75VX8 874 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 PRICKLE2Q7Z3G6 844 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 LSMEM1Q8N8F7 131 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 LSM14AQ8ND56 463 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 QRSL1Q9H0R6 528 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 GHITMQ9H3K2 345 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 MTG2Q9H4K7 406 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 HEXA-AS1Q9H8Q6 139 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 ENAMQ9NRM1 1142 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 IMP3Q9NV31 184 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 TEX10Q9NXF1 929 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 SPG21Q9NZD8 308 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 GRM6O15303 877 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 EEF1E1O43324 174 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 FRS3O43559 492 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 OBSL1O75147 1896 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 CHRM4P08173 479 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 SYPP08247 313 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 ACP5P13686 325 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 TIMP2P16035 220 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 CXCL3P19876 107 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 STOMP27105 288 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 POU4F3Q15319 338 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 PRAMEF14Q5SWL7 426 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 PRAMEF13Q5VWM6 474 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 TRAPPC5Q8IUR0 188 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 LINC00471Q8N535 108 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 FAM46AQ96IP4 442 aaKnown RBP12.89□□□□□ -0.35
HDAC7-228ENST00000548938 YIPF4Q9BSR8 244 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 NUP50Q9UKX7 468 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
HDAC7-228ENST00000548938 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 TEX51A0A1B0GUA7 166 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 CDK2AP1O14519 115 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 KIAA0355O15063 1070 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 RAF1P04049 648 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 GNSP15586 552 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 LAG3P18627 525 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 POLR2CP19387 275 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 BSGP35613 385 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 TRIM23P36406 574 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 SRP9P49458 86 aaKnown RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 FZD5Q13467 585 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 RAB33AQ14088 237 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 KHDRBS2Q5VWX1 349 aaKnown RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 KRT74Q7RTS7 529 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 TRMT11Q7Z4G4 463 aaKnown RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 OR6C4Q8NGE1 309 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 OR5M3Q8NGP4 307 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 OR4Q3Q8NH05 313 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 UBE2E3Q969T4 207 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 SCMH1Q96GD3 660 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 ART5Q96L15 291 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 BTBD1Q9H0C5 482 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 MRPL17Q9NRX2 175 aaKnown RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 CYSLTR2Q9NS75 346 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 TMPRSS11DO60235 418 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 EFCAB14O75071 495 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 TPOP07202 933 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 GAAP10253 952 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 PPP2R1BP30154 601 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 FUT5Q11128 374 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 NTRK2Q16620 822 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 FAM129CQ86XR2 697 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 GPR135Q8IZ08 494 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 ANKRD53Q8N9V6 530 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 KLK6Q92876 244 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms