RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TMEM163Q8TC26 289 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 RNF141Q8WVD5 230 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 RXFP3Q9NSD7 469 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 EVA1BQ9NVM1 165 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 NPFFR2Q9Y5X5 522 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 FAM230AA0A1W2PPH8 454 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 EDNRBP24530 442 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 IDH3GP51553 393 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 LRRTM4Q86VH4 590 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 ADGRF3Q8IZF5 1079 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 CLDN19Q8N6F1 224 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 ECHDC3Q96DC8 303 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF578Q96N58 590 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 RBP7Q96R05 134 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 METTL17Q9H7H0 456 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 B3GALNT1O75752 331 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SOX3P41225 446 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 RNF144AP50876 292 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CASP9P55211 416 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 FUT10Q6P4F1 479 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TAS1R3Q7RTX0 852 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 DGLUCYQ7Z3D6 616 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 FBXO15Q8NCQ5 510 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 OR5W2Q8NH69 310 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CLIP3Q96DZ5 547 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TMEM19Q96HH6 336 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SLC12A9Q9BXP2 914 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 KIF25Q9UIL4 384 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 PADI3Q9ULW8 664 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TRDV1A0A1B0GX56 115 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SLC33A1O00400 549 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SHOXO15266 292 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 AHSA1O95433 338 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 AHCYP23526 432 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ACRV1P26436 265 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 AKT2P31751 481 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ACVRL1P37023 503 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 VEGFCP49767 419 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CAMK2DQ13557 499 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 PAPD4Q6PIY7 484 aaKnown RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 KLHDC8BQ8IXV7 354 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SLC22A15Q8IZD6 547 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 MALSU1Q96EH3 234 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ATOH8Q96SQ7 321 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 SLCO5A1Q9H2Y9 848 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 OR6C2Q9NZP2 312 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 MARCH4Q9P2E8 410 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 PTGDR2Q9Y5Y4 395 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 A8MU76 341 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 RNF13O43567 381 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 HPGDSO60760 199 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 RAF1P04049 648 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ACVR1BP36896 505 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ISL1P61371 349 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TCTE1Q5JU00 501 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 NRROSQ86YC3 692 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 OR10K1Q8NGX5 313 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 GIMAP1Q8WWP7 306 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 RAB8BQ92930 207 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 LRIG1Q96JA1 1093 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 PRRC1Q96M27 445 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 PINK1Q9BXM7 581 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 POLDIP3Q9BY77 421 aaKnown RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 NELFAQ9H3P2 528 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 EPHA6Q9UF33 1036 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 HRH3Q9Y5N1 445 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 NDUFS4O43181 175 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TXNL1O43396 289 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 TCRBP04435 133 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 RPS24P62847 133 aaKnown RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 NKX3-2P78367 333 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CHRNEQ04844 493 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF791Q3KP31 576 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 MTFR2Q6P444 385 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CXCL17Q6UXB2 119 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 GPR142Q7Z601 462 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ENTHD1Q8IYW4 607 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 OR10G6Q8NH81 332 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 DCUN1D4Q92564 292 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 UBXN10Q96LJ8 280 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 PTPN18Q99952 460 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 ZNF559Q9BR84 538 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CPPED1Q9BRF8 314 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-212ENST00000546744 G6PC3Q9BUM1 346 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 C20orf27Q9GZN8 174 aa12.14□□□□□ -0.47
PTCH1-212ENST00000546744 CENPMQ9NSP4 180 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms