RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ANKRD46Q86W74 232 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 C9orf40Q8IXQ3 194 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 GALNT16Q8N428 558 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 KIF2BQ8N4N8 673 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SLC5A8Q8N695 610 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 NATD1Q8N6N6 113 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 AMER2Q8N7J2 671 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 FAM169BQ8N8A8 192 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF321PQ8N8H1 164 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 OR7G2Q8NG99 324 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 OR1N1Q8NGS0 311 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 M1APQ8TC57 530 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 BRIX1Q8TDN6 353 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ELP5Q8TE02 316 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 DOK4Q8TEW6 326 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF721Q8TF20 911 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 KAT2AQ92830 837 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 EXTL1Q92935 676 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 COQ8BQ96D53 544 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ERP27Q96DN0 273 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SENP5Q96HI0 755 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 MS4A4EQ96PG1 132 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 GAL3ST4Q96RP7 486 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 JMJD8Q96S16 334 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ELAC2Q9BQ52 826 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SEMA4CQ9C0C4 833 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 NMUR2Q9GZQ4 415 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 LHPPQ9H008 270 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 EPN3Q9H201 632 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 GCM1Q9NP62 436 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 MRGBPQ9NV56 204 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 DDX18Q9NVP1 670 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 FAM120CQ9NX05 1096 aaKnown RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF223Q9UK11 482 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-211ENST00000546304 ADAM21Q9UKJ8 722 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 PCDHB10Q9UN67 800 aa5.87□□□□□ -1.47
PRKDC-211ENST00000546304 hCG_2014768A0A024R1R8 64 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 A0A087WV62 115 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 RNF103-CHMP3A0A140T963 221 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 A0A1W2PRB8 838 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 FAM234BA2RU67 622 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 A6NL46 340 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR6C76A6NM76 312 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MKRN2OSH3BPM6 223 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PLOD2O00469 737 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PLOD3O60568 738 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PPM1BO75688 479 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CEACAM4O75871 244 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PSMG1O95456 288 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 FAM107AO95990 144 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ALPPP05187 535 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 IL6P05231 212 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ABCB1P08183 1280 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PRKCAP17252 672 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CAPN3P20807 821 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 S100A3P33764 101 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ZFP36L2P47974 494 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 GPR143P51810 404 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 POLR2JP52435 117 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 DGKQP52824 942 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MANFP55145 182 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 WNT3P56703 355 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SLC37A1P57057 533 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SOX8P57073 446 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 KCNK10P57789 538 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 HBA1P69905 142 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PRR5P85299 388 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 RHDQ02161 417 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MGAT2Q10469 447 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 FUT7Q11130 342 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MAP4K2Q12851 820 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF155Q12901 538 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 DUSP8Q13202 625 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 GAB1Q13480 694 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MLC1Q15049 377 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 AGKQ53H12 422 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 FHL5Q5TD97 284 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 GKAP1Q5VSY0 366 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ANXA8L1Q5VT79 327 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 TMEM64Q6YI46 380 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 HSDL2Q6YN16 418 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MSANTD1Q6ZTZ1 278 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SLC29A4Q7RTT9 530 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 MTERF4Q7Z6M4 381 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CLECL1Q8IZS7 167 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 LGI4Q8N135 537 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR2L13Q8N349 312 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SIRT6Q8N6T7 355 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 FDCSPQ8NFU4 85 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR7G1Q8NGA0 311 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR52R1Q8NGF1 315 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR4A15Q8NGL6 344 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR8K3Q8NH51 312 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 C16orf52Q8NHV5 167 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PSMA8Q8TAA3 256 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 NUBPLQ8TB37 319 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SFXN5Q8TD22 340 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms