RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PMM1Q92871 262 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 RGMAQ96B86 450 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 DTD2Q96FN9 168 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 LRR1Q96L50 414 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 COQ10AQ96MF6 247 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 CMTM3Q96MX0 182 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 IL4I1Q96RQ9 567 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 KATNB1Q9BVA0 655 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 RAB11FIP5Q9BXF6 653 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MS4A8Q9BY19 250 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TMPRSS13Q9BYE2 586 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ABCG8Q9H221 673 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 MIXL1Q9H2W2 232 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 FN3KQ9H479 309 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 PIGUQ9H490 435 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 RANBP3Q9H6Z4 567 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 CXorf36Q9H7Y0 433 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 DDX31Q9H8H2 851 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF334Q9HCZ1 680 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 C14orf119Q9NWQ9 140 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SAGE1Q9NXZ1 904 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SRRDQ9UH36 339 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 IL36AQ9UHA7 158 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 A4GNTQ9UNA3 340 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 EXOGQ9Y2C4 368 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 CARD8Q9Y2G2 431 aa6.09□□□□□ -1.43
SNHG1-225ENST00000545920 RBMX2Q9Y388 322 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 SF3B6Q9Y3B4 125 aaKnown RBP6.09□□□□□ -1.43
SNHG1-225ENST00000545920 ANKRD12Q6UB98 2062 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ARPC4-TTLL3A0A0A6YYG9 625 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 A0A1B0GVI7 797 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 FAM240BA0A1B0GVZ2 78 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 FAM170BA6NMN3 283 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 NOTOA8MTQ0 251 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 J3KTA2 159 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 AGRPO00253 132 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 HMGN4O00479 90 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 LYRM1O43325 122 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TLX2O43763 284 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC28A2O43868 658 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TPPPO94811 219 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 UBXN7O94888 489 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 NFATC1O95644 943 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 DHFRP00374 187 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SOD1P00441 154 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TGFB1P01137 390 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 DNTTP04053 509 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TP53P04637 393 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 BCHEP06276 602 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 MSL3P1P0C860 447 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 NR2F1P10589 423 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 PRKCAP17252 672 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 RPL17P18621 184 aaKnown RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 F8A1P23610 371 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 FPR3P25089 353 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ACADLP28330 430 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TEAD1P28347 426 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GABRR2P28476 465 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 RBMS1P29558 406 aaKnown RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GKP32189 559 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 BSGP35613 385 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TALDO1P37837 337 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SOX3P41225 446 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GATA4P43694 442 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 BDKRB1P46663 353 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CCT3P49368 545 aaKnown RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CCR8P51685 355 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CTSCP53634 463 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 EPHA5P54756 1037 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GAS1P54826 345 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 RRAS2P62070 204 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 FPGSQ05932 587 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ST3GAL3Q11203 375 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 NFE2L1Q14494 772 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GINS1Q14691 196 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GANABQ14697 944 aaKnown RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GPNMBQ14956 572 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SNAPC1Q16533 368 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 FNDC3BQ53EP0 1204 aaKnown RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SOWAHCQ53LP3 525 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ATAT1Q5SQI0 421 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 LIPKQ5VXJ0 399 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 NXNL2Q5VZ03 156 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CDC73Q6P1J9 531 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CNKSR3Q6P9H4 555 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 LIPIQ6XZB0 460 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 Q6ZVL8 140 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 OTOP2Q7RTS6 562 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ADGRD2Q7Z7M1 963 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ASPGQ86U10 573 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SAPCD2Q86UD0 394 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 LRRC28Q86X40 367 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GATAD2AQ86YP4 633 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GPALPP1Q8IXQ4 340 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GHDCQ8N2G8 530 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 Q8N402 240 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms