RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 NIPSNAP1Q9BPW8 284 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 CST11Q9H112 138 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 FOLH1BQ9HBA9 442 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 TREM1Q9NP99 234 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 TIGARQ9NQ88 270 aa5.46□□□□□ -1.53
VPS50-220ENST00000544910 TEX51A0A1B0GUA7 166 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 MCIDASD6RGH6 385 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 XKRYO14609 159 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 OLFM2O95897 454 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 AK1P00568 194 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 RLN2P04090 185 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 NDUFV2P19404 249 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 GDI2P50395 445 aaKnown RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 WNT4P56705 351 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 RPL6Q02878 288 aaKnown RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 PCDH1Q08174 1060 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 NKG7Q16617 165 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ADPRMQ3LIE5 342 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 FLYWCH1Q4VC44 716 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF385BQ569K4 471 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 FAM78AQ5JUQ0 283 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 FAM83HQ6ZRV2 1179 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 PTOV1Q86YD1 416 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 LILRB4Q8NHJ6 448 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 SLC38A5Q8WUX1 472 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TSEN15Q8WW01 171 aaKnown RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 HMGB4Q8WW32 186 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TBC1D20Q96BZ9 403 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 EID2BQ96D98 161 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 YIPF6Q96EC8 236 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 APOOQ9BUR5 198 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 COMMD4Q9H0A8 199 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 SACM1LQ9NTJ5 587 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 KLHL21Q9UJP4 597 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 SLC7A7Q9UM01 511 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 IGLV3-16A0A075B6K0 115 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ELAVL4P26378 380 aaKnown RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 HTR2AP28223 471 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 XCR1P46094 333 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 MTNR1AP48039 350 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF81P51508 661 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TAP2Q03519 686 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 POU4F2Q12837 409 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 OCLNQ16625 522 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 LRIT3Q3SXY7 679 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ULK3Q6PHR2 472 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF852Q6ZMS4 543 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 LINGO2Q7L985 606 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 SLC46A3Q7Z3Q1 461 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TECPR1Q7Z6L1 1165 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 NLRP8Q86W28 1048 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 COMMD2Q86X83 199 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF619Q8N2I2 560 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ANKK1Q8NFD2 765 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 NEIL3Q8TAT5 605 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 COQ10AQ96MF6 247 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 OR7D2Q96RA2 312 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 SLC38A3Q99624 504 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 LGR4Q9BXB1 951 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 MTHFD2LQ9H903 347 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 LTB4R2Q9NPC1 389 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 SLC6A13Q9NSD5 602 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TAAR2Q9P1P5 351 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 GPR52Q9Y2T5 361 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TCRBV21S2A2A0A5A6 115 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TSPAN11A1L157 253 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 CD8B2A6NJW9 211 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF670-ZNF695F2Z2N8 137 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 CD8BP10966 210 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 HOXA9P31269 272 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 GABRA3P34903 492 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 CA5AP35218 305 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 RNF144AP50876 292 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 RAB40BQ12829 278 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 FAHD1Q6P587 224 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 QSOX2Q6ZRP7 698 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 SNX29P2Q8IUI4 249 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 MSRB3Q8IXL7 192 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF433Q8N7K0 673 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF615Q8N8J6 731 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ACOT4Q8N9L9 421 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TSACCQ96A04 125 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 GAL3ST3Q96A11 431 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 VMP1Q96GC9 406 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 INSM2Q96T92 566 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 TCEAL7Q9BRU2 100 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 TRIM2Q9C040 744 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 Q9N2J8 555 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 BRD7Q9NPI1 651 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 GDE1Q9NZC3 331 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 ANKMY1Q9P2S6 941 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 IKZF2Q9UKS7 526 aa5.46□□□□□ -1.54
VPS50-220ENST00000544910 NDRG2Q9UN36 371 aaKnown RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 ZNF443Q9Y2A4 671 aaPredicted RBP5.46□□□□□ -1.54
VPS50-220ENST00000544910 K7ESM1 405 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 HOXC11O43248 304 aaPredicted RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 RENP00797 406 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 MRPL3P09001 348 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 ITPKBP27987 946 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms