RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FNDC11Q9BVV2 318 aa13.87□□□□□ -0.19
DDX55-209ENST00000542286 C1QTNF2Q9BXJ5 285 aa13.87□□□□□ -0.19
DDX55-209ENST00000542286 BEX2Q9BXY8 128 aa13.87□□□□□ -0.19
DDX55-209ENST00000542286 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
DDX55-209ENST00000542286 SYNDIG1LA6NDD5 238 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 PVRP15151 417 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 NTSP30990 170 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ACSL1P33121 698 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 OR3A3P47888 321 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 RPS21P63220 83 aaKnown RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 ITPRIPL2Q3MIP1 535 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ARMC4Q5T2S8 1044 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 PLAG1Q6DJT9 500 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 B3GLCTQ6Y288 498 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 PRSS41Q7RTY9 318 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 OR2L8Q8NGY9 312 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 LCN9Q8WX39 176 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 QRFPRQ96P65 431 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 OPALINQ96PE5 141 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 SLC30A2Q9BRI3 323 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 PCBD2Q9H0N5 130 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ACOXLQ9NUZ1 547 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 CHST2Q9Y4C5 530 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 SPEF1Q9Y4P9 236 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 EGFP01133 1207 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 HBQ1P09105 142 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ZNF888P0CJ79 500 aaPredicted RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 TRHRP34981 398 aaPredicted RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 CD79BP40259 229 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ERVK-21P61565 698 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ZNF91Q05481 1191 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 GINS1Q14691 196 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 DEFB134Q4QY38 66 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ZNF776Q68DI1 518 aaPredicted RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 VN1R4Q7Z5H5 301 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ATCAYQ86WG3 371 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 KIF18BQ86Y91 864 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 FLCNQ8NFG4 579 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 TRNT1Q96Q11 434 aaKnown RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 TSSK6Q9BXA6 273 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 CAPN10Q9HC96 672 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 ZNF624Q9P2J8 865 aaPredicted RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 NUFIP1Q9UHK0 495 aaKnown RBP13.86□□□□□ -0.19
DDX55-209ENST00000542286 SLC17A4Q9Y2C5 497 aa13.86□□□□□ -0.19
DDX55-209ENST00000542286 FRYLO94915 3013 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 CACNA1IQ9P0X4 2223 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 P2RX6O15547 441 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 HYAL3O43820 417 aaPredicted RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 PRICKLE3O43900 615 aaPredicted RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 SOX6P35712 828 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 ELOAQ14241 798 aaKnown RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 AGERQ15109 404 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 ZIC1Q15915 447 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 CASP12Q6UXS9 341 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 ZFP41Q8N8Y5 198 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 IL17RCQ8NAC3 791 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 SLC16A11Q8NCK7 471 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 MAP6Q96JE9 813 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 OR7D2Q96RA2 312 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 HHATLQ9HCP6 504 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 MRPS2Q9Y399 296 aaKnown RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 NPIPA5A0A0B4J1W7 369 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 A0A1W2PQF6 199 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 PRSS38A1L453 326 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 C12orf71A8MTZ7 269 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 NPIPA7E9PJI5 369 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 CPNE3O75131 537 aaKnown RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 KLF8O95600 359 aaPredicted RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 ADH1BP00325 375 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 ADAP00813 363 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 NPIPA8P0DM63 369 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 FUT1P19526 365 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 MAN2A2P49641 1150 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 OR2G6Q5TZ20 316 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 MLIPQ5VWP3 458 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 RAB42Q8N4Z0 105 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 FAM46AQ96IP4 442 aaKnown RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 RIPOR3Q96MK2 946 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 MMP28Q9H239 520 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 ACSS1Q9NUB1 689 aaPredicted RBP13.85□□□□□ -0.19
DDX55-209ENST00000542286 PCDHGB2Q9Y5G2 931 aa13.85□□□□□ -0.19
DDX55-209ENST00000542286 SLITRK5O94991 958 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 IL7P13232 177 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 HOXB2P14652 356 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 TNFSF8P32971 234 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 HSD17B2P37059 387 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 ACTR1BP42025 376 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 PDX1P52945 283 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 ACTR1AP61163 376 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 CSNK2BP67870 215 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 ALDH6A1Q02252 535 aaKnown RBP13.84□□□□□ -0.19
DDX55-209ENST00000542286 FLYWCH1Q4VC44 716 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 PRICKLE2Q7Z3G6 844 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 NUP43Q8NFH3 380 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 OR2L5Q8NG80 312 aa13.84□□□□□ -0.19
DDX55-209ENST00000542286 OR8D4Q8NGM9 314 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms