RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 RPH3AQ9Y2J0 694 aaPredicted RBP8.01□□□□□ -1.13
CLSTN3-212ENST00000541770 L3MBTL1Q9Y468 752 aa8.01□□□□□ -1.13
CLSTN3-212ENST00000541770 GPR45Q9Y5Y3 372 aa8.01□□□□□ -1.13
CLSTN3-212ENST00000541770 ARHGAP21Q5T5U3 1957 aa8.01□□□□□ -1.13
CLSTN3-212ENST00000541770 TRBV11-1A0A0K0K1C0 115 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 OR6C76A6NM76 312 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ACOT7O00154 380 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 PLOD2O00469 737 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 PDPK1O15530 556 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 PLOD3O60568 738 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 BCAS2O75934 225 aaPredicted RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZFAND5O76080 213 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 CT62P0C5K7 136 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 S1PR1P21453 382 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ACVR2AP27037 513 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 UQCRC1P31930 480 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 SOX18P35713 384 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 NCBP2P52298 156 aaKnown RBP eCLIP8□□□□□ -1.13
CLSTN3-212ENST00000541770 DLX5P56178 289 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 SLC37A1P57057 533 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 PPIAP62937 165 aaKnown RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 MGAT2Q10469 447 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 KEAP1Q14145 624 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF267Q14586 743 aaPredicted RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 MLC1Q15049 377 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF628Q5EBL2 1059 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 EMC4Q5J8M3 183 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 CPTPQ5TA50 214 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 FAM180BQ6P0A1 224 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 CLEC9AQ6UXN8 241 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 HSDL2Q6YN16 418 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 CDC20BQ86Y33 519 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 KRTCAP2Q8N6L1 136 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF615Q8N8J6 731 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 GLB1L3Q8NCI6 653 aaPredicted RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 OR7A2PQ8NGA2 310 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 OR8J2Q8NGG1 315 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 OR5L2Q8NGL0 311 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZFP28Q8NHY6 868 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 NUBPLQ8TB37 319 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 CHMP6Q96FZ7 201 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 AMDHD1Q96NU7 426 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ALPK1Q96QP1 1244 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 CNPPD1Q9BV87 410 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 GLIPR2Q9H4G4 154 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 NPHS2Q9NP85 383 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 SDR39U1Q9NRG7 319 aaPredicted RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 RASSF1Q9NS23 344 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZIM2Q9NZV7 527 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF223Q9UK11 482 aaPredicted RBP8□□□□□ -1.13
CLSTN3-212ENST00000541770 ERVK-19Q9WJR5 959 aa8□□□□□ -1.13
CLSTN3-212ENST00000541770 A0A087WV62 115 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 E9PBE3 544 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 G3V3Y1 287 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 HRKO00198 91 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 RNASET2O00584 256 aaKnown RBP7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ITGA10O75578 1167 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 CLPSP04118 112 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 LAMP1P11279 417 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 TRHRP34981 398 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ATP4BP51164 291 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 MANFP55145 182 aaKnown RBP7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 UFM1P61960 85 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 RNF4P78317 190 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 RPS6KA2Q15349 733 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 LTB4RQ15722 352 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 METTL21CQ5VZV1 264 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ANKRD26P1Q6NSI1 321 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 CGB2Q6NT52 195 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 FAM111BQ6SJ93 734 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 B3GNT6Q6ZMB0 384 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 RNF111Q6ZNA4 994 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 MDGA2Q7Z553 956 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 LIX1LQ8IVB5 337 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF321PQ8N8H1 164 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ZFP62Q8NB50 900 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 C17orf47Q8NEP4 570 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ADCY4Q8NFM4 1077 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 OR9A2Q8NGT5 310 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 RFWD2Q8NHY2 731 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 PSMA8Q8TAA3 256 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 NUDT8Q8WV74 236 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 OR5P2Q8WZ92 322 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 CIDECQ96AQ7 238 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 ELP4Q96EB1 424 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 C18orf12Q96KH6 178 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 TTYH2Q9BSA4 534 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 DUSP26Q9BV47 211 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 OR10A5Q9H207 317 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 EXO5Q9H790 373 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 TRIM45Q9H8W5 580 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 TIMMDC1Q9NPL8 285 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 MRGBPQ9NV56 204 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 TMEM45AQ9NWC5 275 aa7.99□□□□□ -1.13
CLSTN3-212ENST00000541770 CRIM1Q9NZV1 1036 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms