RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 BTBD2Q9BX70 525 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 RAD21L1Q9H4I0 556 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 KLHL1Q9NR64 748 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 EXD2Q9NVH0 621 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 ABCG2Q9UNQ0 655 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 TSPAN2O60636 221 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 PRB1P04280 392 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 PPIBP23284 216 aaKnown RBP17.26■□□□□ 0.35
VPS33A-205ENST00000541169 FBXW4P57775 412 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 GAB1Q13480 694 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.26■□□□□ 0.35
VPS33A-205ENST00000541169 ATAD3BQ5T9A4 648 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 SAXO2Q658L1 398 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 ZNF621Q6ZSS3 439 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 PRICKLE2Q7Z3G6 844 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 ZNF605Q86T29 641 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 PACS2Q86VP3 889 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 FUNDC1Q8IVP5 155 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 SULF2Q8IWU5 870 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 COX18Q8N8Q8 333 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 SLC16A11Q8NCK7 471 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 OR10G3Q8NGC4 313 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 CPT1CQ8TCG5 803 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 FAR1Q8WVX9 515 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 OIT3Q8WWZ8 545 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 SNRNP40Q96DI7 357 aaKnown RBP17.26■□□□□ 0.35
VPS33A-205ENST00000541169 SLC35G5Q96KT7 338 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 ANGPTL4Q9BY76 406 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 TRIM4Q9C037 500 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 SERHLQ9NQF3 203 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 MAP10Q9P2G4 905 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 LEF1Q9UJU2 399 aaPredicted RBP17.26■□□□□ 0.35
VPS33A-205ENST00000541169 BOKQ9UMX3 212 aaPredicted RBP17.26■□□□□ 0.35
VPS33A-205ENST00000541169 BOD1L1Q8NFC6 3051 aa17.26■□□□□ 0.35
VPS33A-205ENST00000541169 A0A096LPI6 279 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 ACOT7O00154 380 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 NR5A2O00482 541 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 ANGPT2O15123 496 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 GUSBP08236 651 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 SNRPB2P08579 225 aaKnown RBP17.25■□□□□ 0.35
VPS33A-205ENST00000541169 MATN1P21941 496 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 ELAVL4P26378 380 aaKnown RBP17.25■□□□□ 0.35
VPS33A-205ENST00000541169 KHKP50053 298 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 SEC24CP53992 1094 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 KCNJ2P63252 427 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 POU6F2P78424 691 aaPredicted RBP17.25■□□□□ 0.35
VPS33A-205ENST00000541169 COQ5Q5HYK3 327 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 C6orf10Q5SRN2 563 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 CISD2Q8N5K1 135 aaKnown RBP17.25■□□□□ 0.35
VPS33A-205ENST00000541169 OR2M7Q8NG81 312 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 OR5AK3PQ8NH89 298 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 GTF2H4Q92759 462 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 HGDQ93099 445 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 VPS33AQ96AX1 596 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 ADOQ96SZ5 270 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 ELAC2Q9BQ52 826 aaKnown RBP17.25■□□□□ 0.35
VPS33A-205ENST00000541169 DOHHQ9BU89 302 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 HOXD1Q9GZZ0 328 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 EPN3Q9H201 632 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 METTL7AQ9H8H3 244 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 SDHAF3Q9NRP4 125 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 OLAHQ9NV23 265 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 B4GALT7Q9UBV7 327 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 CNOT11Q9UKZ1 510 aaKnown RBP17.25■□□□□ 0.35
VPS33A-205ENST00000541169 CORO2BQ9UQ03 480 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 NDUFAF1Q9Y375 327 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 GMEB1Q9Y692 573 aa17.25■□□□□ 0.35
VPS33A-205ENST00000541169 EXPH5Q8NEV8 1989 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 BBIP1A8MTZ0 92 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 C9JVG2 144 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 SLC28A2O43868 658 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 SNX3O60493 162 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 NPPAP01160 153 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 NGFRP08138 427 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 CCL3P10147 92 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 ACP2P11117 423 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 ENDOUP21128 410 aaKnown RBP17.24■□□□□ 0.35
VPS33A-205ENST00000541169 DRD4P21917 467 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 CASP3P42574 277 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 MAN2A2P49641 1150 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 MEOX1P50221 254 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 DUSP5Q16690 384 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 HYAL4Q2M3T9 481 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 KRTCAP3Q53RY4 240 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 LRIF1Q5T3J3 769 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.24■□□□□ 0.35
VPS33A-205ENST00000541169 SLC22A16Q86VW1 577 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 PRR22Q8IZ63 422 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 OR5M3Q8NGP4 307 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 FAM110BQ8TC76 370 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 GRHL3Q8TE85 626 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 PMM1Q92871 262 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 RMND5BQ96G75 393 aaPredicted RBP17.24■□□□□ 0.35
VPS33A-205ENST00000541169 FRMD6Q96NE9 622 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 IL1RL2Q9HB29 575 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 SLC52A3Q9NQ40 469 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 POLE3Q9NRF9 147 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 QPCTLQ9NXS2 382 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 LUZP4Q9P127 313 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms