RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 VKORC1Q9BQB6 163 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 DUSP26Q9BV47 211 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 NXF5Q9H1B4 397 aaKnown RBP13.06□□□□□ -0.32
LTBR-209ENST00000541102 ZNF385DQ9H6B1 395 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 LDAHQ9H6V9 325 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 EXO5Q9H790 373 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 ZDHHC11Q9H8X9 412 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 PLSCR2Q9NRY7 297 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 SIRT3Q9NTG7 399 aaPredicted RBP13.06□□□□□ -0.32
LTBR-209ENST00000541102 GIMAP4Q9NUV9 329 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 CNOT11Q9UKZ1 510 aaKnown RBP13.06□□□□□ -0.32
LTBR-209ENST00000541102 HRH3Q9Y5N1 445 aa13.06□□□□□ -0.32
LTBR-209ENST00000541102 CHCHD2Q9Y6H1 151 aaPredicted RBP13.06□□□□□ -0.32
LTBR-209ENST00000541102 C6orf47O95873 294 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 TROVE2P10155 538 aaKnown RBP eCLIP13.05□□□□□ -0.32
LTBR-209ENST00000541102 HTR1EP28566 365 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 MPIP34949 423 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 EMDP50402 254 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 GSTA3Q16772 222 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 FAM174BQ3ZCQ3 159 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 GXYLT1Q4G148 440 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 TRILQ7L0X0 811 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 WDR53Q7Z5U6 358 aaPredicted RBP13.05□□□□□ -0.32
LTBR-209ENST00000541102 ANKRD46Q86W74 232 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 EID3Q8N140 333 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 CLEC4FQ8N1N0 589 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 OR52R1Q8NGF1 315 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 STON2Q8WXE9 905 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 TESCQ96BS2 214 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 RILPQ96NA2 401 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 DOHHQ9BU89 302 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 ITPAQ9BY32 194 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 PROK2Q9HC23 129 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 ZFP64Q9NPA5 681 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 TNFRSF10DQ9UBN6 386 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 BOKQ9UMX3 212 aaPredicted RBP13.05□□□□□ -0.32
LTBR-209ENST00000541102 CFL2Q9Y281 166 aa13.05□□□□□ -0.32
LTBR-209ENST00000541102 A0A1W2PRB8 838 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 UPK1AO00322 258 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 SLC22A3O75751 556 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 NCF2P19878 526 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 MAN2A2P49641 1150 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 TMED10P49755 219 aaKnown RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 ARFIP2P53365 341 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 MANFP55145 182 aaKnown RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 CDSNQ15517 529 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 HYAL4Q2M3T9 481 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 ZNF585AQ6P3V2 769 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 SAMD14Q8IZD0 417 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 OR8J2Q8NGG1 315 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 SPPL2AQ8TCT8 520 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 ELP4Q96EB1 424 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 LCORQ96JN0 433 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 DMRTA2Q96SC8 542 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 ELAC2Q9BQ52 826 aaKnown RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 INPP5KQ9BT40 448 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 BHLHE41Q9C0J9 482 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 TP63Q9H3D4 680 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 CXorf36Q9H7Y0 433 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 SLC52A3Q9NQ40 469 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 PNPLA3Q9NST1 481 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 ACSS1Q9NUB1 689 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 KLHL14Q9P2G3 628 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 ACAD8Q9UKU7 415 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 KLF2Q9Y5W3 355 aaPredicted RBP13.04□□□□□ -0.32
LTBR-209ENST00000541102 NBPF19A0A087WUL8 3843 aa13.04□□□□□ -0.32
LTBR-209ENST00000541102 GMNCA6NCL1 334 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 LRRC3CA6NJW4 275 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 PLOD2O00469 737 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 PLOD3O60568 738 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 PSMG1O95456 288 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 CLDN14O95500 239 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 IGHG3P01860 377 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 ABCB1P08183 1280 aaPredicted RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 SNRPB2P08579 225 aaKnown RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 ABCD3P28288 659 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 S100A3P33764 101 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 RPL3P39023 403 aaKnown RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 KIR3DL1P43629 444 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 MASP1P48740 699 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 TRPC1P48995 793 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 MRPL19P49406 292 aaKnown RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 HBA1P69905 142 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 RPP38P78345 283 aaKnown RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 ZNF630Q2M218 657 aaPredicted RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 DESI1Q6ICB0 168 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 TMEM211Q6ICI0 200 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 SLC34A3Q8N130 599 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 MIER2Q8N344 545 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 OR2L13Q8N349 312 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 C17orf47Q8NEP4 570 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 PHF10Q8WUB8 498 aaKnown RBP13.03□□□□□ -0.32
LTBR-209ENST00000541102 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
LTBR-209ENST00000541102 VPS33AQ96AX1 596 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms