RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ARSGQ96EG1 525 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 TSPYL1Q9H0U9 437 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 PFDN4Q9NQP4 134 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 GIMAP4Q9NUV9 329 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 ELOVL5Q9NYP7 299 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF180Q9UJW8 692 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF225Q9UK10 706 aa10.86□□□□□ -0.67
CBX3P4-202ENST00000540428 SLC22A20A6NK97 555 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 A8MT66 165 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 DEFB108AA8MXU0 73 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 MANBAO00462 879 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SMPD2O60906 423 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 TNFRSF21O75509 655 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SLITRK5O94991 958 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 OR4F21O95013 312 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 IL3P08700 152 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SBK3P0C264 359 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 FPR1P21462 350 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 CRYGSP22914 178 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 HSD17B3P37058 310 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 GSTM5P46439 218 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 CORO7P57737 925 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 B3GALT5-AS1P59052 145 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 ETF1P62495 437 aaKnown RBP10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SLC7A5Q01650 507 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 OCRLQ01968 901 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 CLCQ05315 142 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 FAM27E3Q08E93 113 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 GANABQ14697 944 aaKnown RBP10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SPIN4Q56A73 249 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 Q5PR19 223 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 OR5M10Q6IEU7 315 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 NPSR1Q6W5P4 371 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 MEIOBQ8N635 442 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 FADS6Q8N9I5 356 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 OR4K17Q8NGC6 315 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 OR9A2Q8NGT5 310 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 ANP32BQ92688 251 aaKnown RBP10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 MTBPQ96DY7 904 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 COX4I2Q96KJ9 171 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 WFIKKN1Q96NZ8 548 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF382Q96SR6 550 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 HBEGFQ99075 208 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 PAFAH2Q99487 392 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SLC39A3Q9BRY0 314 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 CDC42EP4Q9H3Q1 356 aaKnown RBP10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 FOLH1BQ9HBA9 442 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 SLC35C2Q9NQQ7 365 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 TAS2R9Q9NYW1 312 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 C6orf203Q9P0P8 240 aaPredicted RBP10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 VPS13CQ709C8 3753 aa10.85□□□□□ -0.67
CBX3P4-202ENST00000540428 MED12Q93074 2177 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 A0A087WV62 115 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 GNG14A0A1W2PPG7 69 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 B4DXG7 233 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 SIAH2O43255 324 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 EMC8O43402 210 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 PCDH7O60245 1069 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 COQ9O75208 318 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 ULK1O75385 1050 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 SMNDC1O75940 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 CD8BP10966 210 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 TSPAN8P19075 237 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 MPIP34949 423 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 KIR2DL2P43627 348 aaPredicted RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 RAE1P78406 368 aaKnown RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 CKAP4Q07065 602 aaKnown RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 ACKR1Q16570 336 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 UBAP2Q5T6F2 1119 aaKnown RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 GALNT18Q6P9A2 607 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 VWA1Q6PCB0 445 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 C20orf204Q6ZNR8 217 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 Q71RC1 249 aaPredicted RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 SLC44A2Q8IWA5 706 aaPredicted RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 FAM9CQ8IZT9 166 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 CDYL2Q8N8U2 506 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 CNEP1R1Q8N9A8 125 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 OR2M3Q8NG83 312 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 KAT2AQ92830 837 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 EXOSC8Q96B26 276 aaKnown RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 EFHD2Q96C19 240 aaPredicted RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 C11orf24Q96F05 449 aaPredicted RBP10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 PGM2Q96G03 612 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 FAM111AQ96PZ2 611 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 MED18Q9BUE0 208 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 ANKRA2Q9H9E1 313 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 RNF122Q9H9V4 155 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 SDHAF3Q9NRP4 125 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 SIRT5Q9NXA8 310 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 ABCG2Q9UNQ0 655 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 STK38LQ9Y2H1 464 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF175Q9Y473 711 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 OR10H1Q9Y4A9 318 aa10.84□□□□□ -0.67
CBX3P4-202ENST00000540428 SERTM1A2A2V5 107 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 TRIM49D1C9J1S8 452 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 SUPT7LO94864 414 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms