RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 NDUFAF4Q9P032 175 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 SATB2Q9UPW6 733 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 DSPPQ9NZW4 1301 aa15.75■□□□□ 0.11
COPS3-212ENST00000539941 SYNDIG1LA6NDD5 238 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 H3BNH8 94 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 TGFBR3LH3BV60 316 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 NTN3O00634 580 aaPredicted RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 DLGAP1O14490 977 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 FLRT2O43155 660 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 DNAJB5O75953 348 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 AK1P00568 194 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 ALPLP05186 524 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 GP1BAP07359 652 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 ALOX5P09917 674 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 DUSP7Q16829 419 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 RGS21Q2M5E4 152 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 OTUD3Q5T2D3 398 aaPredicted RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 LAIR1Q6GTX8 287 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 RHBDD2Q6NTF9 364 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 TBPL2Q6SJ96 375 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 BPHLQ86WA6 291 aaPredicted RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 SLC16A11Q8NCK7 471 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 MAGEE2Q8TD90 523 aaPredicted RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 APOBEC4Q8WW27 367 aaKnown RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 TRUB1Q8WWH5 349 aaKnown RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 RIT1Q92963 219 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 CNDP2Q96KP4 475 aaKnown RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 ZNF300Q96RE9 604 aaPredicted RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 SMOC1Q9H4F8 434 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 SYNDIG1Q9H7V2 258 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 TRIM45Q9H8W5 580 aaPredicted RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 ADAP2Q9NPF8 381 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 DHCR7Q9UBM7 475 aaKnown RBP15.74■□□□□ 0.11
COPS3-212ENST00000539941 KCNE3Q9Y6H6 103 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 MAU2Q9Y6X3 613 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 ENPP4Q9Y6X5 453 aa15.74■□□□□ 0.11
COPS3-212ENST00000539941 D6RAR5 112 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 CDC123O75794 336 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 CBX7O95931 251 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 IFNW1P05000 195 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 CT62P0C5K7 136 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ACP2P11117 423 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 TGM1P22735 817 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 MAP3K8P41279 467 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 OR1D4P47884 311 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 EIF2B2P49770 351 aaKnown RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 IST1P53990 364 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 BTG2P78543 158 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 PPP2R2BQ00005 443 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 EPS8Q12929 822 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ERV3-1Q14264 604 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ARHGAP11BQ3KRB8 267 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 C6orf52Q5T4I8 152 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 C16orf87Q6PH81 154 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 QSOX2Q6ZRP7 698 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 TSEN54Q7Z6J9 526 aaKnown RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 SLITRK4Q8IW52 837 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 CHDHQ8NE62 594 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 GPR32P1Q8NGA4 272 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 SLC9A6Q92581 669 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 TFAP2CQ92754 450 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 OTUB1Q96FW1 271 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 RMND5BQ96G75 393 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 ZNF354BQ96LW1 612 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 SLC38A1Q9H2H9 487 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 SIDT1Q9NXL6 827 aaKnown RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 VNN3Q9NY84 501 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 RARRES3Q9UL19 164 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 SAMHD1Q9Y3Z3 626 aaKnown RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 COL5A1P20908 1838 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 MYOCOSA0A1B0GUC4 107 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 LDOC1O95751 146 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 RHCEP18577 417 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 S1PR1P21453 382 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ACP1P24666 158 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 MERTKQ12866 999 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 DUSP5Q16690 384 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 RFX4Q33E94 735 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ARHGAP40Q5TG30 622 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 TCEAL6Q6IPX3 200 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 PMM1Q92871 262 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 CDS1Q92903 461 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 TCEAL3Q969E4 200 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 DOK1Q99704 481 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ADI1Q9BV57 179 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 PINK1Q9BXM7 581 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 ANKRD60Q9BZ19 345 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 MKKSQ9NPJ1 570 aaPredicted RBP15.73■□□□□ 0.11
COPS3-212ENST00000539941 NUP210LQ5VU65 1888 aa15.73■□□□□ 0.11
COPS3-212ENST00000539941 PRAMEF25A6NGN4 478 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 A8MVJ9 347 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 SYT5O00445 386 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 NOL3O60936 208 aaKnown RBP15.72■□□□□ 0.11
COPS3-212ENST00000539941 SULT1C4O75897 302 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 DIRAS1O95057 198 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 HBQ1P09105 142 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 MAOAP21397 527 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 OR1E2P47887 323 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 EXOSC7Q15024 291 aaKnown RBP15.72■□□□□ 0.11
COPS3-212ENST00000539941 MFSD4BQ5TF39 518 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms