RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ATP1B1P05026 303 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 KLK1P06870 262 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ZCCHC18P0CG32 403 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PRKAR1AP10644 381 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ANXA8P13928 327 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ACADSP16219 412 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PSMB5P28074 263 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 TAGLN2P37802 199 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 MDH1P40925 334 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ETV5P41161 510 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ETV4P43268 484 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PPICP45877 212 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 SLC6A8P48029 635 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 BCAP31P51572 246 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 SH3BP2P78314 561 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 CD300CQ08708 224 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF155Q12901 538 aaPredicted RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 GK3PQ14409 553 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 GANABQ14697 944 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 CCSMST1Q4G0I0 132 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 TIGD2Q4W5G0 525 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF385CQ66K41 422 aaPredicted RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM81Q6P7N7 255 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 GALNTL5Q7Z4T8 443 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ADGRG5Q8IZF4 528 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PLD6Q8N2A8 252 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 C10orf53Q8N6V4 93 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 BCORP1Q8N888 145 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF740Q8NDX6 193 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 OR1N1Q8NGS0 311 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 NAT14Q8WUY8 206 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM234Q8WY98 164 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PNPLA2Q96AD5 504 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ZHX1-C8orf76Q96EF9 292 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 OTUB1Q96FW1 271 aaPredicted RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 FCRL1Q96LA6 429 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 OR4K3Q96R72 315 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 CCT8L2Q96SF2 557 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 MTERF1Q99551 399 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 CHCHD6Q9BRQ6 235 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 DUSP26Q9BV47 211 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 POLR2J2Q9GZM3 115 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 TINAGL1Q9GZM7 467 aaPredicted RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 ING2Q9H160 280 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 POLR2J3Q9H1A7 115 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 SLC25A18Q9H1K4 315 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 OR51B5Q9H339 312 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PRORYQ9H606 182 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 S100A14Q9HCY8 104 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 FAM60AQ9NP50 221 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PRDM7Q9NQW5 492 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 PNO1Q9NRX1 252 aaKnown RBP3.34□□□□□ -1.88
PTPN22-211ENST00000538253 SERINC1Q9NRX5 453 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 FBXL4Q9UKA2 621 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 DLGAP4Q9Y2H0 992 aa3.34□□□□□ -1.88
PTPN22-211ENST00000538253 MED19A0JLT2 244 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FEZF1A0PJY2 475 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SH3PXD2BA1X283 911 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FAM149AA5PLN7 773 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 C17orf105B2RV13 164 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SGK494L7N484 410 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CCRL2O00421 344 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SCAMP2O15127 329 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CLOCKO15516 846 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ERAL1O75616 437 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 NR2C1P13056 603 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ANPEPP15144 967 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 BGNP21810 368 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 DRD5P21918 477 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GCAP28676 217 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 BSGP35613 385 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CHI3L1P36222 383 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GDF5P43026 501 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 HTR3AP46098 478 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PTDSS1P48651 473 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PDX1P52945 283 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PNLIPRP2P54317 469 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CDH13P55290 713 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 RAB14P61106 215 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 RPS3AP61247 264 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 PHC1P78364 1004 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 OC90Q02509 493 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 SCRN3Q0VDG4 424 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 TBRG1Q3YBR2 411 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 LIN52Q52LA3 116 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 RPS26P11Q5JNZ5 115 aaPredicted RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GTF2IRD2BQ6EKJ0 949 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FKBP9P1Q75LS8 142 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 CHMP1BQ7LBR1 199 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 GTF2IRD2Q86UP8 949 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 FAM47BQ8NA70 645 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 HAS2Q92819 552 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 COX4I2Q96KJ9 171 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF607Q96SK3 696 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 REPIN1Q9BWE0 567 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 VN1R1Q9GZP7 353 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 KLHL25Q9H0H3 589 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 MOV10Q9HCE1 1003 aaKnown RBP3.33□□□□□ -1.88
PTPN22-211ENST00000538253 TIGARQ9NQ88 270 aa3.33□□□□□ -1.88
PTPN22-211ENST00000538253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms