RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 AMBNQ9NP70 447 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 PRDM9Q9NQV7 894 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 VAPAQ9P0L0 249 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ORC6Q9Y5N6 252 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 FAM171A2A8MVW0 826 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 EIF3FO00303 357 aaPredicted RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 SEC14L2O76054 403 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SOX14O95416 240 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 H6PDO95479 791 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SERPINA1P01009 418 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 C1QCP02747 245 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 FURINP09958 794 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 DDCP20711 480 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 DPP4P27487 766 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PIK3CBP42338 1070 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CRISP3P54108 245 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 EPHA4P54764 986 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 GAB1Q13480 694 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 COX20Q5RI15 118 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 C16orf89Q6UX73 402 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 DHFR2Q86XF0 187 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 VRK2Q86Y07 508 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CDK20Q8IZL9 346 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 OR51L1Q8NGJ5 315 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 HTRA1Q92743 480 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CGREF1Q99674 301 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 TMEM27Q9HBJ8 222 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 OSGIN2Q9Y236 505 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 SNRNP200O75643 2136 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 C4orf51C9J302 202 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 LSM1O15116 133 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 LRP3O75074 770 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 TIPRLO75663 272 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 OR2B6P58173 313 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PPIAP62937 165 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 EEF1A1P68104 462 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 KCNC4Q03721 635 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 NPRL3Q12980 569 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 IL10RAQ13651 578 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 BORAQ6PGQ7 559 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SPATA19Q7Z5L4 167 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 ZNF605Q86T29 641 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 GRAMD2AQ8IUY3 354 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CHERPQ8IWX8 916 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 KIRREL3Q8IZU9 778 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 METTL4Q8N3J2 472 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 DNAJC22Q8N4W6 341 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 HORMAD2Q8N7B1 307 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SYT14Q8NB59 555 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 ABHD11Q8NFV4 315 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 FBXO27Q8NI29 283 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 TANKQ92844 425 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 OMA1Q96E52 524 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 TMEM19Q96HH6 336 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CALHM2Q9HA72 323 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 KLHL13Q9P2N7 655 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PCDHB14Q9Y5E9 798 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PCDHGB3Q9Y5G1 929 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 A0A1W2PR80 420 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 H0YIV9 168 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SCAMP2O15127 329 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 EMC8O43402 210 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PRAMEF2O60811 474 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 ABCB7O75027 752 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 COQ9O75208 318 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 UQCRBP14927 111 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PRKACGP22612 351 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 MMP11P24347 488 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CTBP2P56545 445 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 MC2RQ01718 297 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PCDH1Q08174 1060 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 CES4AQ5XG92 561 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 DGAT2L6Q6ZPD8 337 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 NCCRP1Q6ZVX7 275 aaPredicted RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 ST13P4Q8IZP2 240 aaPredicted RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 FAM181AQ8N9Y4 354 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 GPR119Q8TDV5 335 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 ZG16BQ96DA0 208 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 C7orf26Q96N11 449 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 WDR77Q9BQA1 342 aaPredicted RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 PINK1Q9BXM7 581 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 ADNPQ9H2P0 1102 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 PRDM7Q9NQW5 492 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 NFKBIL1Q9UBC1 381 aaPredicted RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 CFL2Q9Y281 166 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 NTNG1Q9Y2I2 539 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 SAMHD1Q9Y3Z3 626 aaKnown RBP6.72□□□□□ -1.33
MSH6-209ENST00000538136 PCDHGA1Q9Y5H4 931 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 NPFFR2Q9Y5X5 522 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 HS3ST3B1Q9Y662 390 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 DOCK4Q8N1I0 1966 aa6.72□□□□□ -1.33
MSH6-209ENST00000538136 EFSO43281 561 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 ENTPD5O75356 428 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 OR6B1O95007 311 aa6.71□□□□□ -1.33
MSH6-209ENST00000538136 HOXC4P09017 264 aaPredicted RBP6.71□□□□□ -1.33
MSH6-209ENST00000538136 WT1P19544 449 aaPredicted RBP6.71□□□□□ -1.33
MSH6-209ENST00000538136 UQCRC1P31930 480 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms