RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SLC35B4Q969S0 331 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 DNAJA3Q96EY1 480 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 IL21RQ9HBE5 538 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ACKR4Q9NPB9 350 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 FNIP2Q9P278 1114 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SARDHQ9UL12 918 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ICKQ9UPZ9 632 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CARNS1A5YM72 827 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF726A6NNF4 738 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 NPIPA5E9PKD4 350 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 WNT9AO14904 365 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CDC123O75794 336 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ERCC1P07992 297 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 DCTP40126 519 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 FCGRTP55899 365 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 GAB1Q13480 694 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SERINC3Q13530 473 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SLC5A12Q1EHB4 618 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 PROX2Q3B8N5 592 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 FAM69AQ5T7M9 428 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CDHR3Q6ZTQ4 885 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM150AQ86TG1 271 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SERPINA12Q8IW75 414 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 DDOQ99489 341 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 AIG1Q9NVV5 245 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 NPIPA1Q9UND3 350 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 DHDHQ9UQ10 334 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF850A8MQ14 1090 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ADAMTS3O15072 1205 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CHRNA6Q15825 494 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 MINDY1Q8N5J2 469 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 RAET1EQ8TD07 263 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 MAPK15Q8TD08 544 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 PPP1R16AQ96I34 528 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 OR2AG1Q9H205 316 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 APMAPQ9HDC9 416 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 URGCP-MRPS24S4R325 110 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 OTOL1A6NHN0 477 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 RAD51DO75771 328 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 RAB3DO95716 219 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 HLA-AP01891 365 aaKnown RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 GBAP04062 536 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 NRIP1P48552 1158 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 OGDHQ02218 1023 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 TMPRSS9Q7Z410 1059 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 GLYATL2Q8WU03 294 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 LPPQ93052 612 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 NIPSNAP3BQ9BS92 247 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 GPRC5BQ9NZH0 403 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PIM2Q9P1W9 311 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 EXO1Q9UQ84 846 aaKnown RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 HHLA1C9JL84 531 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 S1PR1P21453 382 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 TAP2Q03519 686 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 OR4F6Q8NGB9 312 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 FAM213BQ8TBF2 198 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 WDR26Q9H7D7 661 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 NMUR1Q9HB89 426 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 APOBEC3GQ9HC16 384 aaKnown RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 SPO11Q9Y5K1 396 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 SPATA31D1Q6ZQQ2 1576 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 DCDC2BA2VCK2 349 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 LOC730098B7Z3J9 87 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 YKT6O15498 198 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 ONECUT3O60422 494 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 OR12D1P0DN82 309 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 CPN1P15169 458 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 ADRA2BP18089 450 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 TACR2P21452 398 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PSEN2P49810 448 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 TNFRSF17Q02223 184 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 LRRC32Q14392 662 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 TCTE1Q5JU00 501 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 KCNIP4Q6PIL6 250 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PLEKHH3Q7Z736 793 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PHYKPLQ8IUZ5 450 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 INPP5KQ9BT40 448 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 RRAGCQ9HB90 399 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 KCTD3Q9Y597 815 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 A0A0B4J2A0 478 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 LGALS8O00214 317 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PBX3P40426 434 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 EVX2Q03828 476 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 HTR4Q13639 388 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 C15orf52Q6ZUT6 534 aaKnown RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 DPY19L4Q7Z388 723 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 LINC00116Q8NCU8 138 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 DBF4BQ8NFT6 615 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 NTMT1Q9BV86 223 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 SHPKQ9UHJ6 478 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 ADAM23O75077 832 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 TFAP2AP05549 437 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 SPNP16150 400 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 NFYAP23511 347 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 CXCR1P25024 350 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 C21orf33P30042 268 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-215ENST00000537824 IDUAP35475 653 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 DDOSTP39656 456 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PSMD8P48556 350 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 CRISP1P54107 249 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms