RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DOK4Q8TEW6 326 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 TOE1Q96GM8 510 aaKnown RBP12.52□□□□□ -0.41
VPS33B-202ENST00000535906 Q96MT0 163 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 POT1Q9NUX5 634 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 HRASLS2Q9NWW9 162 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 NTMQ9P121 344 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 SLC22A7Q9Y694 548 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
VPS33B-202ENST00000535906 URADA6NGE7 173 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 C2orf74A8MZ97 194 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ALPPP05187 535 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ALOX12P18054 663 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ID2Q02363 134 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 DOC2BQ14184 412 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 TMEM201Q5SNT2 666 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ATAD3BQ5T9A4 648 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 MEDAGQ5VYS4 303 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ABHD13Q7L211 337 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF438Q7Z4V0 828 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 MEX3DQ86XN8 651 aaKnown RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ZFPM2Q8WW38 1151 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 SLC9A6Q92581 669 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 CDS1Q92903 461 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 MS4A4EQ96PG1 132 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 CPNE5Q9HCH3 593 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 DNAJC27Q9NZQ0 273 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 PAIP2BQ9ULR5 123 aaKnown RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 SPTY2D1-AS1A0A0U1RR47 76 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 NTN1O95631 604 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 HOXC5Q00444 222 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 RHAGQ02094 409 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 CD300CQ08708 224 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 COL19A1Q14993 1142 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 TRMT12Q53H54 448 aaKnown RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 HEPHL1Q6MZM0 1159 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 C1orf94Q6P1W5 598 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 CASP12Q6UXS9 341 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 OR2L13Q8N349 312 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 CLIP4Q8N3C7 705 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 TCEANCQ8N8B7 351 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 RERGQ96A58 199 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ARHGDIGQ99819 225 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF229Q9UJW7 825 aa12.51□□□□□ -0.41
VPS33B-202ENST00000535906 A0A087WUU8 490 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SYT5O00445 386 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TBX1O43435 398 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 HCRTR1O43613 425 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 KIAA0513O60268 411 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 LDB3O75112 727 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 ATP6V1G1O75348 118 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CPMP14384 443 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TRHRP34981 398 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SOX6P35712 828 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TAS2R41P59536 307 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 COX10Q12887 443 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 C1orf61Q13536 156 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 FZD2Q14332 565 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SSX1Q16384 188 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 FAM214AQ32MH5 1076 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 KIAA0895LQ68EN5 471 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CDC73Q6P1J9 531 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 FRRS1Q6ZNA5 592 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TAF8Q7Z7C8 310 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CACTIN-AS1Q8N1I8 211 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CYP4Z2PQ8N1L4 340 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 PARP16Q8N5Y8 322 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TMEM52Q8NDY8 209 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 OR5T3Q8NGG3 340 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SLC6A18Q96N87 628 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 GSDMCQ9BYG8 508 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TVP23BQ9NYZ1 205 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CALML5Q9NZT1 146 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CFL2Q9Y281 166 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 ENTPD2Q9Y5L3 495 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 DUXAA6NLW8 204 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CPSF4LA6NMK7 179 aaKnown RBP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 AQP9O43315 295 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 MED26O95402 600 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SCG5P05408 212 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 CSTF2P33240 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 ETV6P41212 452 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 AVPR1BP47901 424 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 ALDH6A1Q02252 535 aaKnown RBP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SLC13A2Q13183 592 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 NCF4Q15080 339 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms