RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 IFI44Q8TCB0 444 aa10.65□□□□□ -0.7
AMBRA1-211ENST00000533727 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-211ENST00000533727 NPLQ9BXD5 320 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-211ENST00000533727 RNF6Q9Y252 685 aa10.65□□□□□ -0.7
AMBRA1-211ENST00000533727 LOC100130705A0A1B0GUX0 176 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 CDC14CA4D256 554 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 MYH7BA7E2Y1 1941 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 PRRT4C9JH25 899 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 GALR3O60755 368 aaPredicted RBP10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 HTR1EP28566 365 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 PRDX3P30048 256 aaKnown RBP10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 ERVPABLB-1P60509 514 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 GALK2Q01415 458 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 MALLQ13021 153 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 PLEKHG7Q6ZR37 379 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 ADIPOR2Q86V24 386 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 MISPQ8IVT2 679 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 PHTF2Q8N3S3 785 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 GOLM1Q8NBJ4 401 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 FBXL20Q96IG2 436 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 ARL5BQ96KC2 179 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 C1QTNF2Q9BXJ5 285 aa10.65□□□□□ -0.71
AMBRA1-211ENST00000533727 TAF1LQ8IZX4 1826 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TCRBV5S1A1TA0A578 114 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 HTR3EA5X5Y0 456 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TMEM221A6NGB7 291 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 A8MV72 311 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TARM1B6A8C7 271 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 M0R233 179 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 M0R296 226 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 DNAJB5O75953 348 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RAB36O95755 333 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 SLC5A2P31639 672 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 MELKQ14680 651 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RAB39AQ14964 217 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 HENMT1Q5T8I9 393 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 C6orf15Q6UXA7 325 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 OR4N5Q8IXE1 308 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 GATSQ8NAP1 163 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 AURKBQ96GD4 344 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ARRDC1-AS1Q9H2J1 176 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 COL11A2P13942 1736 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 FXYD6-FXYD2A0A087WZ82 144 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 H0YJX3 145 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RNASET2O00584 256 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ARL6IP5O75915 188 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ZNF81P51508 661 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 CBFBQ13951 182 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ANKDD1AQ495B1 522 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TMEM201Q5SNT2 666 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 HAGHLQ6PII5 290 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 PGBD5Q8N414 524 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 IL17RCQ8NAC3 791 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 UBTD2Q8WUN7 234 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 CCDC107Q8WV48 283 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RDH12Q96NR8 316 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 FXYD6Q9H0Q3 95 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 PAQR5Q9NXK6 330 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RABL2BQ9UNT1 228 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 OR5K3A6NET4 321 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 WRBO00258 174 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ADORA3P0DMS8 318 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 F8A1P23610 371 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TEAD1P28347 426 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 GGT5P36269 586 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 GPR18Q14330 331 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 NNATQ16517 81 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ZNF181Q2M3W8 571 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ALG1LQ6GMV1 187 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RAB12Q6IQ22 244 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 YIPF7Q8N8F6 280 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 SPERTQ8NA61 448 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 AQP11Q8NBQ7 271 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TRIM36Q9NQ86 728 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 UNC119BA6NIH7 251 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 A6NL46 340 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 PHYHO14832 338 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 SEC14L5O43304 696 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 CSTBP04080 98 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 GSTT2P0CG29 244 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 PDHA2P29803 388 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 KCTD11Q693B1 232 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ARHGAP11AQ6P4F7 1023 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 UBQLNLQ8IYU4 475 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 FBXL6Q8N531 539 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 CHST4Q8NCG5 386 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 OR1E3Q8WZA6 343 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 GPR160Q9UJ42 338 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 TMPRSS11EQ9UL52 423 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 MRPS2Q9Y399 296 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 RGPD4Q7Z3J3 1758 aa10.64□□□□□ -0.71
AMBRA1-211ENST00000533727 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
AMBRA1-211ENST00000533727 TRBV11-1A0A0K0K1C0 115 aa10.63□□□□□ -0.71
AMBRA1-211ENST00000533727 A0A1W2PPL8 197 aa10.63□□□□□ -0.71
AMBRA1-211ENST00000533727 FUOMA2VDF0 154 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms