RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 TNFRSF10DQ9UBN6 386 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 MRTO4Q9UKD2 239 aaKnown RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 WIF1Q9Y5W5 379 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 PTGDR2Q9Y5Y4 395 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 MYO9AB2RTY4 2548 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 C15orf38-AP3S2A0A0A6YYH1 394 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 TMEM114B3SHH9 223 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 PDPK1O15530 556 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 MAPK1P28482 360 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 SSTR2P30874 369 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 GCKP35557 465 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 TIMP3P35625 211 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 TRPC1P48995 793 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 ZNF844Q08AG5 666 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 ZNHIT3Q15649 155 aaPredicted RBP20.31■□□□□ 0.84
BEST1-207ENST00000533521 KRT71Q3SY84 523 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 DESI1Q6ICB0 168 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 TMEM107Q6UX40 140 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 PLCZ1Q86YW0 608 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 DDIASQ8IXT1 998 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 NATD1Q8N6N6 113 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 WDSUB1Q8N9V3 476 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 FAM83FQ8NEG4 500 aaPredicted RBP20.31■□□□□ 0.84
BEST1-207ENST00000533521 PPCDCQ96CD2 204 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 ABCG2Q9UNQ0 655 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 OR10H1Q9Y4A9 318 aa20.31■□□□□ 0.84
BEST1-207ENST00000533521 INTS1Q8N201 2190 aaKnown RBP20.31■□□□□ 0.84
BEST1-207ENST00000533521 A0A0G2JNJ9 132 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 HSPB2A8KAH6 182 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 GNB5O14775 395 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 PIP5K1BO14986 540 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 TM9SF1O15321 606 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 BIRC5O15392 142 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 RGS16O15492 202 aaPredicted RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 CTIFO43310 598 aaKnown RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 BCKDHAP12694 445 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 CPN1P15169 458 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 CREB1P16220 341 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 MAP3K8P41279 467 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 GAS1P54826 345 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 PSMD4P55036 377 aaKnown RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 RPL38P63173 70 aaKnown RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 ZNF155Q12901 538 aaPredicted RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 MLC1Q15049 377 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 HSPB2Q16082 182 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 SLC25A35Q3KQZ1 300 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 TNFAIP8L3Q5GJ75 292 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 SH2D4BQ5SQS7 431 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 LACC1Q8IV20 430 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 CCDC71Q8IV32 467 aaPredicted RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 ZNF295-AS1Q8N0V1 137 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 OR10Q1Q8NGQ4 319 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 CEP70Q8NHQ1 597 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 C3orf14Q9HBI5 128 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 HHATLQ9HCP6 504 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 GALNT9Q9HCQ5 603 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 Q9N2J8 555 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 Q9UFV3 132 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.3■□□□□ 0.84
BEST1-207ENST00000533521 FIS1Q9Y3D6 152 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 ACTL7BQ9Y614 415 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 V9GYY5 206 aaPredicted RBP20.3■□□□□ 0.84
BEST1-207ENST00000533521 FBN2P35556 2912 aa20.3■□□□□ 0.84
BEST1-207ENST00000533521 CD8B2A6NJW9 211 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 BMP7P18075 431 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 MSX1P28360 303 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 SRD5A2P31213 254 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 CEACAM8P31997 349 aaPredicted RBP20.29■□□□□ 0.84
BEST1-207ENST00000533521 DECR1Q16698 335 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 ACSF3Q4G176 576 aaPredicted RBP20.29■□□□□ 0.84
BEST1-207ENST00000533521 ZCCHC12Q6PEW1 402 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 KIRREL3Q8IZU9 778 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 ABTB1Q969K4 478 aaPredicted RBP20.29■□□□□ 0.84
BEST1-207ENST00000533521 TSSK3Q96PN8 268 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 UGT2B28Q9BY64 529 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 ATP6V1HQ9UI12 483 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 CBLCQ9ULV8 474 aa20.29■□□□□ 0.84
BEST1-207ENST00000533521 TMEM233B4DJY2 109 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 LYPLA1O75608 230 aaPredicted RBP20.28■□□□□ 0.84
BEST1-207ENST00000533521 IL33O95760 270 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 PRPS2P11908 318 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 ARRB2P32121 409 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 ADH7P40394 386 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 SERPINB4P48594 390 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 GAB1Q13480 694 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 TOMM20Q15388 145 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 SMU1Q2TAY7 513 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 VPS26BQ4G0F5 336 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 EIPR1Q53HC9 387 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 WIPI1Q5MNZ9 446 aaPredicted RBP20.28■□□□□ 0.84
BEST1-207ENST00000533521 NSUN5P2Q63ZY6 315 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 ZCCHC23Q6ZST2 131 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 ZNF551Q7Z340 670 aaPredicted RBP20.28■□□□□ 0.84
BEST1-207ENST00000533521 NUDCD3Q8IVD9 361 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 OR4N2Q8NGD1 307 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 ZPLD1Q8TCW7 415 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 WDYHV1Q96HA8 205 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 CALHM2Q9HA72 323 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 SERHLQ9NQF3 203 aa20.28■□□□□ 0.84
BEST1-207ENST00000533521 SDHAF3Q9NRP4 125 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms