RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PCDHGA10Q9Y5H3 936 aa20.51■□□□□ 0.87
LRRK1-208ENST00000532029 IGSF10Q6WRI0 2623 aa20.51■□□□□ 0.87
LRRK1-208ENST00000532029 GXYLT2A0PJZ3 443 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 DUXAA6NLW8 204 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 FAM107AO95990 144 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 PRB1P04280 392 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 PIGAP37287 484 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 RFX3P48380 749 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 KHKP50053 298 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 ANXA11P50995 505 aaKnown RBP20.5■□□□□ 0.87
LRRK1-208ENST00000532029 EFR3AQ14156 821 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 PAGE3Q5JUK9 113 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 EXOSC6Q5RKV6 272 aaKnown RBP20.5■□□□□ 0.87
LRRK1-208ENST00000532029 BCORP1Q8N888 145 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 FAM98AQ8NCA5 519 aaKnown RBP20.5■□□□□ 0.87
LRRK1-208ENST00000532029 SLC35A4Q96G79 324 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 PHF12Q96QT6 1004 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 OR7D2Q96RA2 312 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 ADOQ96SZ5 270 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 PAIP1Q9H074 479 aaKnown RBP20.5■□□□□ 0.87
LRRK1-208ENST00000532029 CNIH4Q9P003 139 aa20.5■□□□□ 0.87
LRRK1-208ENST00000532029 OR6C70A6NIJ9 312 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 KLRC4-KLRK1H3BQV0 150 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 HS6ST1O60243 411 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 TSPAN2O60636 221 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 PNLIPRP2P54317 469 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 POU6F2P78424 691 aaPredicted RBP20.49■□□□□ 0.87
LRRK1-208ENST00000532029 GTDC1Q4AE62 458 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 GKAP1Q5VSY0 366 aaPredicted RBP20.49■□□□□ 0.87
LRRK1-208ENST00000532029 RPUSD3Q6P087 351 aaKnown RBP20.49■□□□□ 0.87
LRRK1-208ENST00000532029 Q8NA96 180 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 DNAJB8Q8NHS0 232 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 SPPL2AQ8TCT8 520 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 PAQR8Q8TEZ7 354 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 ZFP90Q8TF47 636 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 DIO2Q92813 273 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 CDS1Q92903 461 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 EFHD2Q96C19 240 aaPredicted RBP20.49■□□□□ 0.87
LRRK1-208ENST00000532029 TMCO6Q96DC7 493 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 SECISBP2Q96T21 854 aaKnown RBP20.49■□□□□ 0.87
LRRK1-208ENST00000532029 BTBD2Q9BX70 525 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 OR51I1Q9H343 314 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 SLC6A13Q9NSD5 602 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 ATMQ13315 3056 aa20.49■□□□□ 0.87
LRRK1-208ENST00000532029 TTLL8A6PVC2 850 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 UGT2B11O75310 529 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 SORBS2O94875 1100 aaKnown RBP20.48■□□□□ 0.87
LRRK1-208ENST00000532029 RASAL1O95294 804 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 IL33O95760 270 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 AGR2O95994 175 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 CCL3P10147 92 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 MAN2A2P49641 1150 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 CASP9P55211 416 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 TXNL4AP83876 142 aaKnown RBP20.48■□□□□ 0.87
LRRK1-208ENST00000532029 INAQ16352 499 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 MMEL1Q495T6 779 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 LRIF1Q5T3J3 769 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 TNFAIP8L2Q6P589 184 aaPredicted RBP20.48■□□□□ 0.87
LRRK1-208ENST00000532029 SNX32Q86XE0 403 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 RNF130Q86XS8 419 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 FBXW8Q8N3Y1 598 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 OR5D16Q8NGK9 328 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 PNPT1Q8TCS8 783 aaKnown RBP20.48■□□□□ 0.87
LRRK1-208ENST00000532029 MIPOL1Q8TD10 442 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 HGDQ93099 445 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 SERHL2Q9H4I8 314 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 TPT1P8Q9HAU6 139 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 SH2D2AQ9NP31 389 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 EXD2Q9NVH0 621 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 MAP10Q9P2G4 905 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 PCDHB14Q9Y5E9 798 aa20.48■□□□□ 0.87
LRRK1-208ENST00000532029 CHCHD2Q9Y6H1 151 aaPredicted RBP20.48■□□□□ 0.87
LRRK1-208ENST00000532029 ATRXP46100 2492 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 BBIP1A8MTZ0 92 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 PEX1O43933 1283 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 KCNK2O95069 426 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 CNR1P21554 472 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 PTPN6P29350 595 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 GPR85P60893 370 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 NFYCQ13952 458 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 CYLC2Q14093 348 aaPredicted RBP20.47■□□□□ 0.87
LRRK1-208ENST00000532029 ATAD3BQ5T9A4 648 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 DHDDSQ86SQ9 333 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 SULF2Q8IWU5 870 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 ZNF843Q8N446 348 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 G6PC3Q9BUM1 346 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 CCDC106Q9BWC9 280 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 RAD21L1Q9H4I0 556 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 METTL7AQ9H8H3 244 aa20.47■□□□□ 0.87
LRRK1-208ENST00000532029 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.47■□□□□ 0.87
LRRK1-208ENST00000532029 CNOT11Q9UKZ1 510 aaKnown RBP20.47■□□□□ 0.87
LRRK1-208ENST00000532029 LOC100653049A0A140TA62 436 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 G3V3Y1 287 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 ASNA1O43681 348 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 DCTN3O75935 186 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 KRT34O76011 436 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 AK1P00568 194 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 OR12D1P0DN82 309 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 ATP6V1C1P21283 382 aa20.46■□□□□ 0.87
LRRK1-208ENST00000532029 MAGEA8P43361 318 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms