RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CALML5Q9NZT1 146 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 HYKKA2RU49 373 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 MYL12BO14950 172 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 AQP9O43315 295 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 APOL3O95236 402 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 MED26O95402 600 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 PSMA1P25786 263 aaKnown RBP16.44■□□□□ 0.22
USH1C-205ENST00000527020 MLLT1Q03111 559 aaPredicted RBP16.44■□□□□ 0.22
USH1C-205ENST00000527020 RUNX2Q13950 521 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 FAM214AQ32MH5 1076 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 PRRT3Q5FWE3 981 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 FCRL6Q6DN72 434 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 SLC27A4Q6P1M0 643 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 LSRQ86X29 649 aaPredicted RBP16.44■□□□□ 0.22
USH1C-205ENST00000527020 NKAIN4Q8IVV8 208 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 SHISA5Q8N114 240 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 LRRC25Q8N386 305 aaPredicted RBP16.44■□□□□ 0.22
USH1C-205ENST00000527020 POC5Q8NA72 575 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 OR52P1PQ8NH57 321 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ZCCHC10Q8TBK6 192 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 NR4A3Q92570 626 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 HTRA1Q92743 480 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 WDR92Q96MX6 357 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 MIR1-1HGQ9H1L0 117 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 FBRSQ9HAH7 460 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 GPR52Q9Y2T5 361 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ZNF670-ZNF695F2Z2N8 137 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 TNFSF14O43557 240 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 KCNK2O95069 426 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ACTR1BP42025 376 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ACTR1AP61163 376 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 C3orf38Q5JPI3 329 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ATAD3BQ5T9A4 648 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 CDC73Q6P1J9 531 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ZNF730Q6ZMV8 503 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 RASSF6Q6ZTQ3 369 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 TEX47Q8TBZ9 253 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 ADAMTS15Q8TE58 950 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 SIPA1Q96FS4 1042 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 MS4A4EQ96PG1 132 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 SMURF1Q9HCE7 757 aa16.44■□□□□ 0.22
USH1C-205ENST00000527020 FGF20Q9NP95 211 aaPredicted RBP16.44■□□□□ 0.22
USH1C-205ENST00000527020 PRODHO43272 600 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 ACP2P11117 423 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 IMPDH2P12268 514 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 UGT2B7P16662 529 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 ALOX12P18054 663 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 CPN2P22792 545 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 CTHP32929 405 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 ACSL1P33121 698 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SIM1P81133 766 aaPredicted RBP16.43■□□□□ 0.22
USH1C-205ENST00000527020 ST3GAL3Q11203 375 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 DEFB134Q4QY38 66 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 USP30Q70CQ3 517 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 TRIM69Q86WT6 500 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 OR2L13Q8N349 312 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 COL26A1Q96A83 441 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 S1PR5Q9H228 398 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 ANKRD19PQ9H560 264 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 CLEC1BQ9P126 229 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SLC13A4Q9UKG4 626 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 COL4A2P08572 1712 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SLC35G6P0C7Q6 338 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 CCNYL3P0C7X3 344 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 CPEP16870 476 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 TNFSF8P32971 234 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 TFF2Q03403 129 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 C1DQ13901 141 aaKnown RBP16.43■□□□□ 0.22
USH1C-205ENST00000527020 KIR2DS3Q14952 304 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SPANXN2Q5MJ10 180 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 PPP2R2DQ66LE6 453 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 TYW3Q6IPR3 259 aaKnown RBP16.43■□□□□ 0.22
USH1C-205ENST00000527020 SLC36A4Q6YBV0 504 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 TM9SF4Q92544 642 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SLC9A6Q92581 669 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 RNFT2Q96EX2 444 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SERINC2Q96SA4 455 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 INIPQ9NRY2 104 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SACM1LQ9NTJ5 587 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 ANKMY1Q9P2S6 941 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 PHF11Q9UIL8 331 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 PILRAQ9UKJ1 303 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 SCML1Q9UN30 329 aa16.43■□□□□ 0.22
USH1C-205ENST00000527020 ZNF443Q9Y2A4 671 aaPredicted RBP16.43■□□□□ 0.22
USH1C-205ENST00000527020 CENPVL1A0A0U1RR11 272 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 KDM4EB2RXH2 506 aaPredicted RBP16.42■□□□□ 0.22
USH1C-205ENST00000527020 KLF4O43474 513 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 SNX4O95219 450 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 PTTG1O95997 202 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 IFNGR2P38484 337 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 TGM4P49221 684 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 DUSP5Q16690 384 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 DECR1Q16698 335 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 PUS10Q3MIT2 529 aaKnown RBP16.42■□□□□ 0.22
USH1C-205ENST00000527020 KLHL22Q53GT1 634 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 TMEM31Q5JXX7 168 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 OR2G6Q5TZ20 316 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 GDF7Q7Z4P5 450 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 C11orf74Q86VG3 221 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms