RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 GPR171O14626 319 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PHF1O43189 567 aaPredicted RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 SSX5O60225 188 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 TBX10O75333 385 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CTAG2O75638 210 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 GGPS1O95749 300 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 GAS8O95995 478 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CPA3P15088 417 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 GALP22466 123 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CCNE1P24864 410 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 GNA11P29992 359 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 SLC1A1P43005 524 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CRKLP46109 303 aaKnown RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 ZFP36L2P47974 494 aaKnown RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 RGS7P49802 495 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 GMPSP49915 693 aaPredicted RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 CCNG1P51959 295 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 RAB14P61106 215 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PSMC5P62195 406 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 TRA2BP62995 288 aaKnown RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 C2orf54Q08AI8 447 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 RBBP7Q16576 425 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 HIGD2BQ4VC39 106 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 THEM4Q5T1C6 240 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 SEL1L3Q68CR1 1132 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 OR52E8Q6IFG1 317 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 TTC27Q6P3X3 843 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 IYDQ6PHW0 289 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PRSS55Q6UWB4 352 aaPredicted RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 ENPP7Q6UWV6 458 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 IDO2Q6ZQW0 420 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 STOX1Q6ZVD7 989 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 UTS2BQ765I0 119 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 TRPM8Q7Z2W7 1104 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PHLDB2Q86SQ0 1253 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 ITIH5Q86UX2 942 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 ELMOD1Q8N336 334 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CCDC63Q8NA47 563 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CLHC1Q8NHS4 586 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 RPLP0P6Q8NHW5 317 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CHURC1Q8WUH1 139 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 TOMM40LQ969M1 308 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PIWIL1Q96J94 861 aaKnown RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 AK8Q96MA6 479 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 ANKRD27Q96NW4 1050 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 RIT2Q99578 217 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 SLC29A1Q99808 456 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CTRCQ99895 268 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CCM2Q9BSQ5 444 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 NAA11Q9BSU3 229 aaPredicted RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 GPR61Q9BZJ8 451 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 BCL2L14Q9BZR8 327 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 C1orf21Q9H246 121 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 DPH5Q9H2P9 285 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 RNF121Q9H920 327 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 SP140LQ9H930 580 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 VCX3AQ9NNX9 186 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 IL1RAPQ9NPH3 570 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 NINJ2Q9NZG7 142 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PKD2L2Q9NZM6 624 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 AKAP7Q9P0M2 348 aaPredicted RBP3.12□□□□□ -1.91
CD44-217ENST00000525348 COX16Q9P0S2 106 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CYB5R1Q9UHQ9 305 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 CYTH4Q9UIA0 394 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PILRAQ9UKJ1 303 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 ENTPD4Q9Y227 616 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 LRRC42Q9Y546 428 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 PCDHGA1Q9Y5H4 931 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 ELP1O95163 1332 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 NPHP3Q7Z494 1330 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 ANKRD30BQ9BXX2 1392 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 KIF15Q9NS87 1388 aa3.12□□□□□ -1.91
CD44-217ENST00000525348 LRP6O75581 1613 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 RTEL1-TNFRSF6BF6WH68 1400 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 IQGAP1P46940 1657 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 ADGBQ8N7X0 1667 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 PLA2R1Q13018 1463 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 MAGI2Q86UL8 1455 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 IGLV3-10A0A075B6K4 115 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 A0A0U1RQV5 110 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 SERTM2A0A1B0GWG4 89 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 GSAPA4D1B5 854 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 ARGFXA6NJG6 315 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 ZSCAN5BA6NJL1 495 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 SYCE1LA8MT33 242 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 A8MVM7 634 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 CENPBD1B2RD01 187 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 GPR89AB7ZAQ6 455 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 LAD1O00515 517 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 IFIT3O14879 490 aaKnown RBP3.11□□□□□ -1.91
CD44-217ENST00000525348 BET1O15155 118 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 CASC3O15234 703 aaKnown RBP3.11□□□□□ -1.91
CD44-217ENST00000525348 GALR3O60755 368 aaPredicted RBP3.11□□□□□ -1.91
CD44-217ENST00000525348 PEX11AO75192 247 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 GPX5O75715 221 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 CRTAPO75718 401 aaPredicted RBP3.11□□□□□ -1.91
CD44-217ENST00000525348 LUC7L3O95232 432 aaKnown RBP3.11□□□□□ -1.91
CD44-217ENST00000525348 PLEKHA8P1O95397 391 aa3.11□□□□□ -1.91
CD44-217ENST00000525348 KRT6AP02538 564 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms