RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 MSANTD3Q96H12 275 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 MCHR1Q99705 422 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 LRRC61Q9BV99 259 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 PHF7Q9BWX1 381 aaPredicted RBP13.09□□□□□ -0.31
SMIM12-206ENST00000521580 CNOT2Q9NZN8 540 aaKnown RBP13.09□□□□□ -0.31
SMIM12-206ENST00000521580 CNIH4Q9P003 139 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 CHST2Q9Y4C5 530 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 COL4A2P08572 1712 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 GPR75O95800 540 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 PTNP21246 168 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 MAOBP27338 520 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 RFX3P48380 749 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 SNRPGP62308 76 aaKnown RBP13.09□□□□□ -0.31
SMIM12-206ENST00000521580 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
SMIM12-206ENST00000521580 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
SMIM12-206ENST00000521580 C1orf94Q6P1W5 598 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 OR9A4Q8NGU2 314 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
SMIM12-206ENST00000521580 ZNF443Q9Y2A4 671 aaPredicted RBP13.09□□□□□ -0.31
SMIM12-206ENST00000521580 IFNGR2P38484 337 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 GIPRP48546 466 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 TDGQ13569 410 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 NR1D2Q14995 579 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 ZNF628Q5EBL2 1059 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 ENTPD8Q5MY95 495 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 HEPHL1Q6MZM0 1159 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 AVL9Q8NBF6 648 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.31
SMIM12-206ENST00000521580 GPR151Q8TDV0 419 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 PIK3R3Q92569 461 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 DCSTAMPQ9H295 470 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 EGLN3Q9H6Z9 239 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 ZBTB20Q9HC78 741 aaPredicted RBP13.08□□□□□ -0.31
SMIM12-206ENST00000521580 NTMQ9P121 344 aa13.08□□□□□ -0.31
SMIM12-206ENST00000521580 C19orf53Q9UNZ5 99 aaPredicted RBP13.08□□□□□ -0.31
SMIM12-206ENST00000521580 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
SMIM12-206ENST00000521580 ADRA2AP08913 450 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 ALOX5P09917 674 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 RELAQ04206 551 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
SMIM12-206ENST00000521580 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 PRICKLE2Q7Z3G6 844 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SLC46A3Q7Z3Q1 461 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SLC34A3Q8N130 599 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 CA13Q8N1Q1 262 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 COX18Q8N8Q8 333 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 FNDC8Q8TC99 324 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 TRUB1Q8WWH5 349 aaKnown RBP13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SH3YL1Q96HL8 342 aaPredicted RBP13.08□□□□□ -0.32
SMIM12-206ENST00000521580 FAM46AQ96IP4 442 aaKnown RBP13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SDF2Q99470 211 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 ANKHQ9HCJ1 492 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 IFT52Q9Y366 437 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SLC9B1P1A6NJY1 282 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 CYR61O00622 381 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 PRKYO43930 277 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 CKMT1AP12532 417 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 GSTM3P21266 225 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 PCYT1AP49585 367 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 MAP4K2Q12851 820 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 GAS6Q14393 721 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 TEX47Q8TBZ9 253 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 DIO2Q92813 273 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 CHCHD6Q9BRQ6 235 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 SEMA6CQ9H3T2 930 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 POMT2Q9UKY4 750 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 KLK4Q9Y5K2 254 aa13.08□□□□□ -0.32
SMIM12-206ENST00000521580 NPIPA5A0A0B4J1W7 369 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 CENPVL1A0A0U1RR11 272 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 NPIPA7E9PJI5 369 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 OR10H2O60403 315 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 PFDN1O60925 122 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 NPIPA8P0DM63 369 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 IRF3Q14653 427 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 CLEC12AQ5QGZ9 265 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 LSRQ86X29 649 aaPredicted RBP13.07□□□□□ -0.32
SMIM12-206ENST00000521580 NKAIN4Q8IVV8 208 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 GJD3Q8N144 294 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 MGLLQ99685 303 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 TSSK6Q9BXA6 273 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 CDCA4Q9BXL8 241 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 PLA2G12AQ9BZM1 189 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 OR51E2Q9H255 320 aa13.07□□□□□ -0.32
SMIM12-206ENST00000521580 DSN1Q9H410 356 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms