RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GHDCQ8N2G8 530 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 OR4A15Q8NGL6 344 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 PRR7Q8TB68 274 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 GPR151Q8TDV0 419 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 STON2Q8WXE9 905 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 SLC9A6Q92581 669 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 NTNG2Q96CW9 530 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 ZNF597Q96LX8 424 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 ZDHHC11Q9H8X9 412 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 ZFP64Q9NPA5 681 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 ZIM2Q9NZV7 527 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 NBASA2RRP1 2371 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 LRRC3CA6NJW4 275 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 C9JVG2 144 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 SLC22A3O75751 556 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 HMGN2P05204 90 aaKnown RBP20.15■□□□□ 0.82
VEGFA-217ENST00000518538 PGRP06401 933 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 ACP2P11117 423 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 SOAT1P35610 550 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 TP53BP2Q13625 1128 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 LASP1Q14847 261 aaKnown RBP20.15■□□□□ 0.82
VEGFA-217ENST00000518538 CMPK2Q5EBM0 449 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 SLC30A6Q6NXT4 461 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 BHLHB9Q6PI77 547 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 PACS2Q86VP3 889 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 ANKRD46Q86W74 232 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 FAM109AQ8N4B1 249 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 TMEM251Q8N6I4 163 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 SLC16A11Q8NCK7 471 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 OR52N2Q8NGI0 321 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 EFHD2Q96C19 240 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-217ENST00000518538 C16orf58Q96GQ5 468 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 OSBPL11Q9BXB4 747 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 EML6Q6ZMW3 1958 aa20.15■□□□□ 0.82
VEGFA-217ENST00000518538 GXYLT2A0PJZ3 443 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 PRAMEF25A6NGN4 478 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 KCNH1O95259 989 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 IL33O95760 270 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 ALOX5P09917 674 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 PTGDSP41222 190 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 MRPL19P49406 292 aaKnown RBP20.14■□□□□ 0.81
VEGFA-217ENST00000518538 DGKQP52824 942 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 PSMD4P55036 377 aaKnown RBP20.14■□□□□ 0.81
VEGFA-217ENST00000518538 RBPJQ06330 500 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 DUSP5Q16690 384 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 MIER2Q8N344 545 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 OR5AK3PQ8NH89 298 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 FBXO30Q8TB52 745 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 PIK3R3Q92569 461 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 JADE3Q92613 823 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 RMND5BQ96G75 393 aaPredicted RBP20.14■□□□□ 0.81
VEGFA-217ENST00000518538 TMEM41AQ96HV5 264 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 JSRP1Q96MG2 331 aaPredicted RBP20.14■□□□□ 0.81
VEGFA-217ENST00000518538 CCDC115Q96NT0 180 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 OR52E6Q96RD3 313 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 STACQ99469 402 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 SIKE1Q9BRV8 207 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 YIPF4Q9BSR8 244 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 ACTRT3Q9BYD9 372 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 ZNF703Q9H7S9 590 aaPredicted RBP20.14■□□□□ 0.81
VEGFA-217ENST00000518538 GPATCH2Q9NW75 528 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 GIN1Q9NXP7 522 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 KLRF1Q9NZS2 232 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 BTNL2Q9UIR0 455 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 OSGIN2Q9Y236 505 aa20.14■□□□□ 0.81
VEGFA-217ENST00000518538 IL6P05231 212 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 KRT16P08779 473 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 CYP4B1P13584 511 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 MAGEA5P43359 124 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 MASP1P48740 699 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 LRRC74AQ0VAA2 488 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.13■□□□□ 0.812e-13■□□□□ 10.4
VEGFA-217ENST00000518538 CDC73Q6P1J9 531 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 RNF138Q8WVD3 245 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 DEFB127Q9H1M4 99 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 NPHS2Q9NP85 383 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 DUSP22Q9NRW4 184 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 PLSCR2Q9NRY7 297 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 B4GALT7Q9UBV7 327 aa20.13■□□□□ 0.81
VEGFA-217ENST00000518538 FAF1Q9UNN5 650 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-217ENST00000518538 HELZ2Q9BYK8 2649 aaKnown RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 RNF103-CHMP3A0A140T963 221 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 CDC40O60508 579 aaKnown RBP eCLIP20.12■□□□□ 0.812e-13■■□□□ 11.5
VEGFA-217ENST00000518538 ICOSLGO75144 302 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 SOX30O94993 753 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 CPSF4O95639 269 aaKnown RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 STSP08842 583 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 RFPL3SP0C7P2 107 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 ELAVL4P26378 380 aaKnown RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 ZFP36L2P47974 494 aaKnown RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 STX1BP61266 288 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 GUCY1A3Q02108 690 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 FNDC7Q5VTL7 733 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 PAOXQ6QHF9 649 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 COX18Q8N8Q8 333 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 GOT1L1Q8NHS2 421 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 THOC1Q96FV9 657 aaKnown RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 PIGUQ9H490 435 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 CCDC134Q9H6E4 229 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 GALNT9Q9HCQ5 603 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms