RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 ITPAQ9BY32 194 aa9.67□□□□□ -0.86
NFKB1-211ENST00000513803 DDX31Q9H8H2 851 aaKnown RBP9.67□□□□□ -0.86
NFKB1-211ENST00000513803 FOLH1BQ9HBA9 442 aa9.67□□□□□ -0.86
NFKB1-211ENST00000513803 PPANQ9NQ55 473 aaKnown RBP9.67□□□□□ -0.86
NFKB1-211ENST00000513803 CBLN4Q9NTU7 201 aa9.67□□□□□ -0.86
NFKB1-211ENST00000513803 XPR1Q9UBH6 696 aa9.67□□□□□ -0.86
NFKB1-211ENST00000513803 CLEC4AQ9UMR7 237 aa9.67□□□□□ -0.86
NFKB1-211ENST00000513803 AP4B1Q9Y6B7 739 aa9.67□□□□□ -0.86
NFKB1-211ENST00000513803 OR2M5A3KFT3 312 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 H3BML4 177 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PGRMC2O15173 223 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 TMPRSS11DO60235 418 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 RAMP1O60894 148 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 EEDO75530 441 aaKnown RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 KRT14P02533 472 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 BMP4P12644 408 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 APEHP13798 732 aaKnown RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 CPMP14384 443 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PORP16435 677 aaPredicted RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 TTKP33981 857 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 KRT20P35900 424 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PIK3CBP42338 1070 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 EIF1AXP47813 144 aaKnown RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 EFNA4P52798 201 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 CDH11P55287 796 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 ACTG1P63261 375 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 MAP4K2Q12851 820 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 DDX39BQ13838 428 aaKnown RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 EFR3AQ14156 821 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 GGTLC2Q14390 218 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 GANABQ14697 944 aaKnown RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 KCTD19Q17RG1 926 aaPredicted RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 SFRP5Q5T4F7 317 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 TEDDM1Q5T9Z0 273 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 CCDC25Q86WR0 208 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 ZNF619Q8N2I2 560 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 BANPQ8N9N5 519 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 HUS1BQ8NHY5 278 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 TMBIM1Q969X1 311 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 ESAMQ96AP7 390 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 SLC35A4Q96G79 324 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 ADOQ96SZ5 270 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 TMEM79Q9BSE2 394 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 DSN1Q9H410 356 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 OCEL1Q9H607 264 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PTGES2Q9H7Z7 377 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 FBXO34Q9NWN3 711 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PAQR5Q9NXK6 330 aaPredicted RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PPP4R1LQ9P1A2 415 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 PRODH2Q9UF12 536 aa9.66□□□□□ -0.86
NFKB1-211ENST00000513803 MCTS1Q9ULC4 181 aaKnown RBP9.66□□□□□ -0.86
NFKB1-211ENST00000513803 A0A0A6YYD5 115 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 A0A1W2PS29 197 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 SHISA9B4DS77 424 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 H7C417 338 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 CCNT2O60583 730 aaKnown RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 SYNGR4O95473 234 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 TUBBP07437 444 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 BSGP35613 385 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 SLC6A8P48029 635 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 PSPHP78330 225 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 MRPS22P82650 360 aaKnown RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 IRF9Q00978 393 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 E2F2Q14209 437 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 P2RY6Q15077 328 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 PDCD2Q16342 344 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 GLYR1Q49A26 553 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 FBXO48Q5FWF7 155 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 SPANXN3Q5MJ09 141 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 PRR31Q5SQ13 230 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 SSX8Q7RTT4 187 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 ATG4DQ86TL0 474 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 FBXL14Q8N1E6 418 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 RNF10Q8N5U6 811 aaKnown RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 OR52B6Q8NGF0 335 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 HTRA1Q92743 480 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 KAT2AQ92830 837 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 KISS1RQ969F8 398 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 CERS2Q96G23 380 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 NAT9Q9BTE0 207 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 BRINP2Q9C0B6 783 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 DDX47Q9H0S4 455 aaKnown RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 C12orf49Q9H741 205 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 SDHAF3Q9NRP4 125 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 ASIC3Q9UHC3 531 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 GPR55Q9Y2T6 319 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-211ENST00000513803 ZNF281Q9Y2X9 895 aa9.65□□□□□ -0.86
NFKB1-211ENST00000513803 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 NDUFS8O00217 210 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
NFKB1-211ENST00000513803 GCM2O75603 506 aaPredicted RBP9.64□□□□□ -0.87
NFKB1-211ENST00000513803 FGGP02679 453 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 EPORP19235 508 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 IL12BP29460 328 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 PNLIPRP2P54317 469 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 GAS1P54826 345 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 PHEXP78562 749 aa9.64□□□□□ -0.87
NFKB1-211ENST00000513803 EXOSC7Q15024 291 aaKnown RBP9.64□□□□□ -0.87
NFKB1-211ENST00000513803 TSC22D1Q15714 1073 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms