RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DEKP35659 375 aaKnown RBP9.37□□□□□ -0.91
CLDND1-227ENST00000513452 PPICP45877 212 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 ARFIP1P53367 373 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 SLC12A2P55011 1212 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 DSCR9P59020 149 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 RPS3AP61247 264 aaKnown RBP9.37□□□□□ -0.91
CLDND1-227ENST00000513452 PHEXP78562 749 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 BSPH1Q075Z2 132 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 MGAT2Q10469 447 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 SLMAPQ14BN4 828 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 PRICKLE4Q2TBC4 344 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 FAM166AQ6J272 317 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 METTL25Q8N6Q8 603 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 STEAP2Q8NFT2 490 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 OR52R1Q8NGF1 315 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 HTRA1Q92743 480 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 SLC35A4Q96G79 324 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 C1orf159Q96HA4 380 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 GMPPAQ96IJ6 420 aaPredicted RBP9.37□□□□□ -0.91
CLDND1-227ENST00000513452 ADAM19Q9H013 955 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 L2HGDHQ9H9P8 463 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 POPDC3Q9HBV1 291 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 NGBQ9NPG2 151 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 FAIMQ9NVQ4 179 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 MAT2BQ9NZL9 334 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 PPP4R1LQ9P1A2 415 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 WHRNQ9P202 907 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 OPTCQ9UBM4 332 aa9.37□□□□□ -0.91
CLDND1-227ENST00000513452 TENM1Q9UKZ4 2725 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 TO15178 435 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 PHGDHO43175 533 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CBX7O95931 251 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CCDC166P0CW27 439 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 DRD5P21918 477 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 PTX3P26022 381 aaPredicted RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 IL12BP29460 328 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 ELK3P41970 407 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 EIF1AXP47813 144 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 GAS1P54826 345 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CDH11P55287 796 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CORO7P57737 925 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 C21orf58P58505 322 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 IRX1P78414 480 aaPredicted RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 STX5Q13190 355 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 SQLEQ14534 574 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 TAB1Q15750 504 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CCDC137Q6PK04 289 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 DNAJC14Q6Y2X3 702 aaPredicted RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 LARP4Q71RC2 724 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 FADS6Q8N9I5 356 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 OR2M3Q8NG83 312 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 FAM168AQ92567 244 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 ADAD1Q96M93 576 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 NAP1L3Q99457 506 aaPredicted RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CACNG6Q9BXT2 260 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 C12orf65Q9H3J6 166 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 C12orf49Q9H741 205 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CAB39LQ9H9S4 337 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 EML4Q9HC35 981 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 ZBTB26Q9HCK0 441 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 CISD1Q9NZ45 108 aaKnown RBP9.36□□□□□ -0.91
CLDND1-227ENST00000513452 SNX8Q9Y5X2 465 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 SVEP1Q4LDE5 3571 aa9.36□□□□□ -0.91
CLDND1-227ENST00000513452 LOC100289279A0A1B0GTE1 492 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 GOLGA6L10A6NI86 522 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 LINC01387J3KSC0 135 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 K7EPI3 171 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 EIF1AYO14602 144 aaKnown RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 TCF21O43680 179 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 KIAA0513O60268 411 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 TSPAN2O60636 221 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 RAMP1O60894 148 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 NME6O75414 186 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 WISP3O95389 354 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 ATP1B1P05026 303 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 CD1DP15813 335 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 PCSK2P16519 638 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 ITGA2P17301 1181 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 IL11P20809 199 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 USF1P22415 310 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 IL32P24001 234 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 ADH6P28332 368 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 AGTR1P30556 359 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 EVI2BP34910 448 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 KRT20P35900 424 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 FEN1P39748 380 aaKnown RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 EMDP50402 254 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 ZNF75DP51815 510 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 GPX6P59796 221 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 MRPS35P82673 323 aaKnown RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 IRF9Q00978 393 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 MAP4K2Q12851 820 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 CUL3Q13618 768 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 EFR3AQ14156 821 aa9.35□□□□□ -0.91
CLDND1-227ENST00000513452 GANABQ14697 944 aaKnown RBP9.35□□□□□ -0.91
CLDND1-227ENST00000513452 LTB4RQ15722 352 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms