RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ANKRD27	Q96NW4	1050 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	NODAL	Q96S42	347 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	MFRP	Q9BY79	579 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	PIGU	Q9H490	435 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	NANOG	Q9H9S0	305 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	CMTM6	Q9NX76	183 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	PACSIN3	Q9UKS6	424 aa		13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	YARS2	Q9Y2Z4	477 aa	Known RBP	13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.4	□□□□□ -0.26
MATR3-238	ENST00000512107	PINLYP	A6NC86	204 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107		A8MVJ9	347 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	TNFRSF21	O75509	655 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	KCNK2	O95069	426 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	ANP32D	O95626	131 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	ALOX5	P09917	674 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	PTGDS	P41222	190 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	PRIM2	P49643	509 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	RNF144A	P50876	292 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	MRPS22	P82650	360 aa	Known RBP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	RGN	Q15493	299 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	MAPRE2	Q15555	327 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	SYPL1	Q16563	259 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	COQ5	Q5HYK3	327 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	ABHD17B	Q5VST6	288 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	HEPHL1	Q6MZM0	1159 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	RINL	Q6ZS11	566 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	PTOV1	Q86YD1	416 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	SLC34A3	Q8N130	599 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	LGI4	Q8N135	537 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	C17orf47	Q8NEP4	570 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	OR10G3	Q8NGC4	313 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	OR52N2	Q8NGI0	321 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	GPR151	Q8TDV0	419 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	JADE3	Q92613	823 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	TMEM125	Q96AQ2	219 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	MOAP1	Q96BY2	351 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	NTNG2	Q96CW9	530 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	BBC3	Q96PG8	261 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	KLHDC3	Q9BQ90	382 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	RUBCNL	Q9H714	662 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	DEPP	Q9NTK1	212 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	TAGLN3	Q9UI15	199 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	KCNE5	Q9UJ90	142 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	CBLC	Q9ULV8	474 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	NPFFR2	Q9Y5X5	522 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	GMEB1	Q9Y692	573 aa		13.39	□□□□□ -0.27
MATR3-238	ENST00000512107	CCT8L1P	A6NM43	557 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	BBIP1	A8MTZ0	92 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107		G3V3Y1	287 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	FCMR	O60667	390 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	WISP2	O76076	250 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	CHRM4	P08173	479 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	CCL3	P10147	92 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	CYP4B1	P13584	511 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	SLC6A2	P23975	617 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	CPOX	P36551	454 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	PIGA	P37287	484 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	HLCS	P50747	726 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	SSR4	P51571	173 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	SLC25A3	Q00325	362 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	LRRC74A	Q0VAA2	488 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	MMEL1	Q495T6	779 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	NADK2	Q4G0N4	442 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	HLA-DQA1	Q5Y7H0	255 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	ZCCHC12	Q6PEW1	402 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	ANGPTL8	Q6UXH0	198 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	APOOL	Q6UXV4	268 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	XAGE5	Q8WWM1	108 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	HAS2	Q92819	552 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	MAL2	Q969L2	176 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	ZG16B	Q96DA0	208 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	NSL1	Q96IY1	281 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	ADO	Q96SZ5	270 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	STAC	Q99469	402 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	PIF1	Q9H611	641 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	GIN1	Q9NXP7	522 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	LUZP4	Q9P127	313 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	LHX6	Q9UPM6	363 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	CFL2	Q9Y281	166 aa		13.38	□□□□□ -0.27
MATR3-238	ENST00000512107	NCKAP5	O14513	1909 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	UNC79	Q9P2D8	2635 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	C2orf72	A6NCS6	295 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	MKRN2OS	H3BPM6	223 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	NME4	O00746	187 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	GCM2	O75603	506 aa	Predicted RBP	13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	PPM1B	O75688	479 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	IL33	O95760	270 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	BMP2	P12643	396 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	GPX2	P18283	190 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	RFX3	P48380	749 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	NUDT2	P50583	147 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	DCAF7	P61962	342 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	RHD	Q02161	417 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	PLAUR	Q03405	335 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	PLCXD2	Q0VAA5	305 aa		13.37	□□□□□ -0.27
MATR3-238	ENST00000512107	STX5	Q13190	355 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms