RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CILP2Q8IUL8 1156 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PAPD5Q8NDF8 572 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TCP10LQ8TDR4 215 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NEK7Q8TDX7 302 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CA5BP1Q8WTZ4 195 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 MAFIPQ8WZ33 124 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CNOT9Q92600 299 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NRGNQ92686 78 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SEPT5Q99719 369 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRMT1Q99873 361 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZYG11BQ9C0D3 744 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 EBF3Q9H4W6 596 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CAB39LQ9H9S4 337 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PLGRKTQ9HBL7 147 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 BARX1Q9HBU1 254 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 LPAR2Q9HBW0 351 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 APOBEC3GQ9HC16 384 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC6A13Q9NSD5 602 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM49BQ9NUQ9 324 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC2A8Q9NY64 477 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 RPL26L1Q9UNX3 145 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ANK1P16157 1881 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 WDR27A2RRH5 827 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SIGLEC16A6NMB1 481 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 F8W036 122 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM189-UBE2V1I3L0A0 370 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SNAI2O43623 268 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 GATBO75879 557 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 OAZ2O95190 189 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NCK1P16333 377 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 EDN2P20800 178 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SDHBP21912 280 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 WARSP23381 471 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CRABP1P29762 137 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NTSR1P30989 418 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TIA1P31483 386 aaKnown RBP eCLIP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 KLK7P49862 253 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TAS2R60P59551 318 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZFP36L1Q07352 338 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SERTAD2Q14140 314 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 C5orf64Q2M2E5 130 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 COL28A1Q2UY09 1125 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADPRMQ3LIE5 342 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 LRRC73Q5JTD7 316 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 WASHC2DQ5SRD0 308 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 MEDAGQ5VYS4 303 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASPHD2Q6ICH7 369 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NIPAL1Q6NVV3 410 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 BHLHB9Q6PI77 547 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 KCNIP4Q6PIL6 250 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACAD11Q709F0 780 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACOT1Q86TX2 421 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 GSPT2Q8IYD1 628 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC35F6Q8N357 371 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PCDH20Q8N6Y1 951 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 LRRC52Q8N7C0 313 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 UBL4BQ8N7F7 174 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 C12orf29Q8N999 325 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR5M8Q8NGP6 311 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 LHFPL5Q8TAF8 219 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRMT10AQ8TBZ6 339 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PIWIL2Q8TC59 973 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 GIPC3Q8TF64 312 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM172AQ8WUF8 416 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SMPDL3AQ92484 453 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 HOXB13Q92826 284 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 BORCS5Q969J3 196 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 HARBI1Q96MB7 349 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SPAG8Q99932 426 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 OMDQ99983 421 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NEURL2Q9BR09 285 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SRRQ9GZT4 340 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SDCBP2Q9H190 292 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PIGUQ9H490 435 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMLHEQ9NVH6 421 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NKX1-2Q9UD57 310 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC12A6Q9UHW9 1150 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 MRM2Q9UI43 246 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 WASF2Q9Y6W5 498 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CCDC195A0A1B0GUA6 201 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 MYBPHLA2RUH7 354 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 C7orf72A4D263 438 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 MAGEB17A8MXT2 336 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 M0QZQ0 153 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 P2RY10O00398 339 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CLDN5O00501 218 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 SIVA1O15304 175 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 CCL16O15467 120 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 MOSPD3O75425 235 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 RBMXL2O75526 392 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 MED6O75586 246 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR6A2O95222 327 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 SEC24AO95486 1093 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FGGP02679 453 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 GPIP06744 558 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 C8AP07357 584 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 RRASP10301 218 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FCGR2AP12318 317 aa4.7□□□□□ -1.66
TRAPPC11-208ENST00000511955 FPR1P21462 350 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms