RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 C16orf58Q96GQ5 468 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 GNRHR2Q96P88 292 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
DDX41-212ENST00000511040 DUSP26Q9BV47 211 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 OSBPL11Q9BXB4 747 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 DPY30Q9C005 99 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 SLC6A15Q9H2J7 730 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 EXO5Q9H790 373 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 C3orf14Q9HBI5 128 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 ATAD3AQ9NVI7 634 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 CBLCQ9ULV8 474 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 HRH3Q9Y5N1 445 aa12.79□□□□□ -0.36
DDX41-212ENST00000511040 DIDO1Q9BTC0 2240 aaKnown RBP12.78□□□□□ -0.36
DDX41-212ENST00000511040 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 WIPF3A6NGB9 483 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 TRPC5OSA6NMA1 111 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 C17orf51A8MQB3 221 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 C9JVG2 144 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 NPIPA2E9PIF3 369 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 NPIPA3F8WFD2 350 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 PRRG2O14669 202 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 KLF11O14901 512 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 ICOSLGO75144 302 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 ACP2P11117 423 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
DDX41-212ENST00000511040 CYP4B1P13584 511 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 C21orf58P58505 322 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 EFR3AQ14156 821 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 SPDYE7PQ495Y7 208 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 CYP27C1Q4G0S4 372 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 HIST2H2BCQ6DN03 193 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 OR4F3Q6IEY1 312 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 ARHGAP11AQ6P4F7 1023 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 PAOXQ6QHF9 649 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 GALNT10Q86SR1 603 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 CLECL1Q8IZS7 167 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 OR5M9Q8NGP3 310 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 CEP70Q8NHQ1 597 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 FAM57AQ8TBR7 257 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 LRRC8CQ8TDW0 803 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 DYDC1Q8WWB3 177 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 SLC9A6Q92581 669 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 JADE3Q92613 823 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 TMCO6Q96DC7 493 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 FAM120BQ96EK7 910 aaKnown RBP12.78□□□□□ -0.36
DDX41-212ENST00000511040 GIMAP5Q96F15 307 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 RMND5BQ96G75 393 aaPredicted RBP12.78□□□□□ -0.36
DDX41-212ENST00000511040 CCDC120Q96HB5 630 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 MARK4Q96L34 752 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 MS4A4EQ96PG1 132 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 BHLHE41Q9C0J9 482 aaPredicted RBP12.78□□□□□ -0.36
DDX41-212ENST00000511040 CXorf36Q9H7Y0 433 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 Q9N2J8 555 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 SERHLQ9NQF3 203 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 ZCCHC3Q9NUD5 404 aaKnown RBP12.78□□□□□ -0.36
DDX41-212ENST00000511040 SPRR3Q9UBC9 169 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 MAPRE3Q9UPY8 281 aa12.78□□□□□ -0.36
DDX41-212ENST00000511040 TRGV5A0A0B4J1U4 118 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 ANKRD28O15084 1053 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 SCO2O43819 266 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 ABCB7O75027 752 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 IGKV1D-16P01601 117 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 IGHG3P01860 377 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 IFI6P09912 130 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 ENDOUP21128 410 aaKnown RBP12.77□□□□□ -0.37
DDX41-212ENST00000511040 SOAT1P35610 550 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 MAN2A2P49641 1150 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 PNLIPRP2P54317 469 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 WNT3P56703 355 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 UFM1P61960 85 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 MLC1Q15049 377 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 DECR1Q16698 335 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 LSM12Q3MHD2 195 aaKnown RBP12.77□□□□□ -0.37
DDX41-212ENST00000511040 SLC9B1Q4ZJI4 515 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 TIGD3Q6B0B8 471 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 OR5M10Q6IEU7 315 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 MFSD12Q6NUT3 480 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 SLC30A6Q6NXT4 461 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 ANKRD46Q86W74 232 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 CLEC4FQ8N1N0 589 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 SLC16A11Q8NCK7 471 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 OR1J4Q8NGS1 313 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 OR5AK3PQ8NH89 298 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 NTNG2Q96CW9 530 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 CHMP6Q96FZ7 201 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 TMEM41AQ96HV5 264 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 TEX37Q96LM6 180 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 SLCO1B3Q9NPD5 702 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 AIG1Q9NVV5 245 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 NTMQ9P121 344 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 SUCOQ9UBS9 1254 aaKnown RBP12.77□□□□□ -0.37
DDX41-212ENST00000511040 C15orf41Q9Y2V0 281 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 MEMO1Q9Y316 297 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms