RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 NUDT13Q86X67 352 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 THNSL2Q86YJ6 484 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF101Q8IZC7 436 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF687Q8N1G0 1237 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KDM1BQ8NB78 822 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PIGXQ8TBF5 258 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC37A2Q8TED4 501 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RND1Q92730 232 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TIMD4Q96H15 378 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KCNC2Q96PR1 638 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MRPL57Q9BQC6 102 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 GORASP1Q9BQQ3 440 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 EBPLQ9BY08 206 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PAIP1Q9H074 479 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC25A18Q9H1K4 315 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 OR51V1Q9H2C8 321 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CD248Q9HCU0 757 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC40A1Q9NP59 571 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 C14orf105Q9NVL8 296 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TAS2R9Q9NYW1 312 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RABL2AQ9UBK7 228 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FOXD3Q9UJU5 478 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 UTS2RQ9UKP6 389 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC5A6Q9Y289 635 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM96BQ9Y3D0 163 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SAMHD1Q9Y3Z3 626 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 USP3Q9Y6I4 520 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NOTCH2Q04721 2471 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 A0A087WUU8 490 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1W2PRG6 482 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 OR51F1A6NGY5 319 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 GABRR3A8MPY1 467 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 E7ENX8 843 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 E2F3O00716 465 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 LIASO43766 372 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 BCAS2O75934 225 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CLIC3O95833 236 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MAP3K8P41279 467 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FASLGP48023 281 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ABATP80404 500 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TAP2Q03519 686 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLAMF1Q13291 335 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MAB21L1Q13394 359 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SEMA5AQ13591 1074 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RFX4Q33E94 735 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SFT2D3Q587I9 215 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF789Q5FWF6 425 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 LCN1P1Q5VSP4 162 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM17Q86X19 198 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ARHGAP12Q8IWW6 846 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZZZ3Q8IYH5 903 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RNF113BQ8IZP6 322 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FBXL14Q8N1E6 418 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RASGEF1CQ8N431 466 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 UBASH3BQ8TF42 649 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RFKQ969G6 155 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ALG14Q96F25 216 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC35G5Q96KT7 338 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NUAK2Q9H093 628 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 LRTM1Q9HBL6 345 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CD320Q9NPF0 282 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SPANXA1Q9NS26 97 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF226Q9NYT6 803 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PLA2G3Q9NZ20 509 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 EHD3Q9NZN3 535 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KCNN3Q9UGI6 736 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 IL20RAQ9UHF4 553 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC24A2Q9UI40 661 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TFR2Q9UP52 801 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SPTY2D1-AS1A0A0U1RR47 76 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PRORSD1PA6NEY8 169 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 GGT3PA6NGU5 568 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ACOD1A6NK06 481 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CREG1O75629 220 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 UNC5CO95185 931 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PNPP00491 289 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 GYPCP04921 128 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KLK1P06870 262 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CELA2BP08218 269 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PGAM2P15259 253 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TSPAN8P19075 237 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 AQP1P29972 269 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MEOX1P50221 254 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 AQP5P55064 265 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 GPR85P60893 370 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SIRPAP78324 504 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SHC2P98077 582 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC5A12Q1EHB4 618 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PYCR3Q53H96 274 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 OR4C11Q6IEV9 310 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 WDR74Q6RFH5 385 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 UTS2BQ765I0 119 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TMPRSS7Q7RTY8 843 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PIWIL4Q7Z3Z4 852 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 DHFR2Q86XF0 187 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SCUBE1Q8IWY4 988 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 LAS2Q8IYD9 372 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM86B1Q8N7N1 296 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KCTD4Q8WVF5 259 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RHBDF1Q96CC6 855 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms