RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 ANKRD27Q96NW4 1050 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 OR7D2Q96RA2 312 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 CGREF1Q99674 301 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 CPPED1Q9BRF8 314 aaPredicted RBP9.46□□□□□ -0.9
HTT-204ENST00000508321 EFCAB1Q9HAE3 211 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 TIMMDC1Q9NPL8 285 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 POLE3Q9NRF9 147 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 SLC25A37Q9NYZ2 338 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 CALML5Q9NZT1 146 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 VAPAQ9P0L0 249 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 P2RX2Q9UBL9 471 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 ABCG2Q9UNQ0 655 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 ERVK-11Q9UQG0 969 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 LIPT1Q9Y234 373 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 TP53TG5Q9Y2B4 290 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 NPFFR2Q9Y5X5 522 aa9.46□□□□□ -0.9
HTT-204ENST00000508321 LOC100653049A0A140TA62 436 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 FXYD1O00168 92 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 CLIC1O00299 241 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 DNAJA2O60884 412 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 SLC25A12O75746 678 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 KRT34O76011 436 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 IL33O95760 270 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 WDPCPO95876 746 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 GSNP06396 782 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 NGFRP08138 427 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 CD46P15529 392 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 GPX2P18283 190 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 CALB2P22676 271 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 GABRA3P34903 492 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 NUDT2P50583 147 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 TNFSF10P50591 281 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 PNLIPRP2P54317 469 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 DSTNP60981 165 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 OC90Q02509 493 aaPredicted RBP9.45□□□□□ -0.9
HTT-204ENST00000508321 SNTA1Q13424 505 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 ART3Q13508 389 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 OR1C1Q15619 314 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 NNATQ16517 81 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 DUSP5Q16690 384 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 ZNF791Q3KP31 576 aaPredicted RBP9.45□□□□□ -0.9
HTT-204ENST00000508321 GTDC1Q4AE62 458 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 HEPHL1Q6MZM0 1159 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 LINC00696Q6ZRV3 163 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 ASB18Q6ZVZ8 466 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 NUP54Q7Z3B4 507 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 C16orf62Q7Z3J2 963 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 MSRB3Q8IXL7 192 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 FBXW8Q8N3Y1 598 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 FITM2Q8N6M3 262 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 METTL25Q8N6Q8 603 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 POU5F2Q8N7G0 328 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 TMEM178AQ8NBL3 297 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 SLC16A11Q8NCK7 471 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 MDS2Q8NDY4 140 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 CHDHQ8NE62 594 aaPredicted RBP9.45□□□□□ -0.9
HTT-204ENST00000508321 DIO2Q92813 273 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 PMM1Q92871 262 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 LRRC58Q96CX6 371 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 TMCO6Q96DC7 493 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 DTNBP1Q96EV8 351 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 RMND5BQ96G75 393 aaPredicted RBP9.45□□□□□ -0.9
HTT-204ENST00000508321 COL21A1Q96P44 957 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 HOPXQ9BPY8 73 aaPredicted RBP9.45□□□□□ -0.9
HTT-204ENST00000508321 SLC25A18Q9H1K4 315 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 OR51I1Q9H343 314 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 SLC6A13Q9NSD5 602 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 CNIH4Q9P003 139 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 LRFN1Q9P244 771 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
HTT-204ENST00000508321 KLF13Q9Y2Y9 288 aaPredicted RBP9.45□□□□□ -0.9
HTT-204ENST00000508321 SPTA1P02549 2419 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 TLN1Q9Y490 2541 aaKnown RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 HMGN4O00479 90 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 MAN1A2O60476 641 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 TSPAN2O60636 221 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 HNRNPCL1O60812 293 aaKnown RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 OR6B1O95007 311 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 ENDOUP21128 410 aaKnown RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 ATP6V1C1P21283 382 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 CRATP43155 626 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 MVDP53602 400 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 RPS26P62854 115 aaKnown RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 RGNQ15493 299 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 ARHGAP11BQ3KRB8 267 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 RUNDC3AQ59EK9 446 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 DCST2Q5T1A1 773 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 GCNT6Q5T4J0 391 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 PRAMEF8Q5VWM4 474 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 PRAMEF7Q5VXH5 474 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 TNFAIP8L2Q6P589 184 aaPredicted RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 SERPINA11Q86U17 422 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 SLC30A8Q8IWU4 369 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 BCORP1Q8N888 145 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 ZNF527Q8NB42 609 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 FAM98AQ8NCA5 519 aaKnown RBP9.44□□□□□ -0.9
HTT-204ENST00000508321 PSD4Q8NDX1 1056 aa9.44□□□□□ -0.9
HTT-204ENST00000508321 OR5D16Q8NGK9 328 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms