RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 GSTA3Q16772 222 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 EIF2S3LQ2VIR3 472 aaKnown RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 ELOA3BQ3SY89 546 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 CYP27C1Q4G0S4 372 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ZNF385BQ569K4 471 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 CT45A2Q5DJT8 189 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 FHL5Q5TD97 284 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 TMEM198Q66K66 360 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 BHLHB9Q6PI77 547 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 EPGNQ6UW88 154 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 GFRALQ6UXV0 394 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 CAMKMTQ7Z624 323 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SLC22A16Q86VW1 577 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SLC44A2Q8IWA5 706 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 PRR22Q8IZ63 422 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SLC34A3Q8N130 599 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 FBXW8Q8N3Y1 598 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 KRTCAP2Q8N6L1 136 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 CDRT4Q8N9R6 151 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ZFP62Q8NB50 900 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 GLB1L3Q8NCI6 653 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 ELOA3Q8NG57 546 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 OR2M7Q8NG81 312 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 OR10G3Q8NGC4 313 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 OR8J2Q8NGG1 315 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SPPL2AQ8TCT8 520 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 DIO2Q92813 273 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 TMBIM1Q969X1 311 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 MOAP1Q96BY2 351 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 OMA1Q96E52 524 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 MAELQ96JY0 434 aaKnown RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 VSTM2LQ96N03 204 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 GPR137Q96N19 417 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 BTBD9Q96Q07 612 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 MDFIQ99750 246 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SLX1AQ9BQ83 275 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 C12orf49Q9H741 205 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ANKRA2Q9H9E1 313 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 IL1RL2Q9HB29 575 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 Q9N2J8 555 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SH2D2AQ9NP31 389 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 BOKQ9UMX3 212 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 NPIPA1Q9UND3 350 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 DTX4Q9Y2E6 619 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SNX8Q9Y5X2 465 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 USH1CQ9Y6N9 552 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 CFAP46Q8IYW2 2715 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ATRXP46100 2492 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 PRSS51A0A1B0GVH4 220 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 G3V3Y1 287 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 RNASET2O00584 256 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 ZNF195O14628 629 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 UBDO15205 165 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 POLR3GO15318 223 aaPredicted RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 HS6ST1O60243 411 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLC22A3O75751 556 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 UNC5CO95185 931 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 KCNH1O95259 989 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 KRT16P08779 473 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 ALOX5P09917 674 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CCL3P10147 92 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 EPXP11678 715 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 VAMP1P23763 118 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 GABRA3P34903 492 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 PIGAP37287 484 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 DNASE1L1P49184 302 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CCT3P49368 545 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 CLK3P49761 638 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 CDK9P50750 372 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 TDGF1P3P51864 188 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 AQP5P55064 265 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CASP6P55212 293 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 NME5P56597 212 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CORO7P57737 925 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 UFM1P61960 85 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 PPIAP62937 165 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 PSG6Q00889 435 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 LRRC74AQ0VAA2 488 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 MRPL49Q13405 166 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 SNTA1Q13424 505 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 GAB1Q13480 694 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLC10A1Q14973 349 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 DECR1Q16698 335 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 HYAL4Q2M3T9 481 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SPDYE7PQ495Y7 208 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLC9B1Q4ZJI4 515 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLC30A6Q6NXT4 461 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 TMEM64Q6YI46 380 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SZRD1Q7Z422 152 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 GHDCQ8N2G8 530 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 PSMA8Q8TAA3 256 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 GPR151Q8TDV0 419 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLC9A6Q92581 669 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 TESCQ96BS2 214 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 DTNBP1Q96EV8 351 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLC35A4Q96G79 324 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 JSRP1Q96MG2 331 aaPredicted RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 COL21A1Q96P44 957 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 MS4A4EQ96PG1 132 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms