RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SOAT1P35610 550 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 FOXK1P85037 733 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 FOXO1Q12778 655 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 TIGD2Q4W5G0 525 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 RNFT1Q5M7Z0 435 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 CDC73Q6P1J9 531 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 C6orf120Q7Z4R8 191 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 PIK3R3Q92569 461 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 VPS33AQ96AX1 596 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 COL21A1Q96P44 957 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 PANX1Q96RD7 426 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 ADOQ96SZ5 270 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 ANGPTL4Q9BY76 406 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 PIGUQ9H490 435 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 RABEP2Q9H5N1 569 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 PRRC2CQ9Y520 2896 aaKnown RBP23.05■■□□□ 1.28
LSM6-202ENST00000502781 EXPH5Q8NEV8 1989 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 GXYLT2A0PJZ3 443 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 G3V3Y1 287 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 SOX30O94993 753 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 IL33O95760 270 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 ALOX5P09917 674 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 PLA2G2AP14555 144 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 LSP1P33241 339 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 CASP3P42574 277 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 CDKN2CP42773 168 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 RPP38P78345 283 aaKnown RBP23.04■■□□□ 1.28
LSM6-202ENST00000502781 EFR3AQ14156 821 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 DECR1Q16698 335 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 TBCELQ5QJ74 424 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 PRAMEF20Q5VT98 475 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 SAXO2Q658L1 398 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 SIAH3Q8IW03 269 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 CLEC4FQ8N1N0 589 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 FBXO30Q8TB52 745 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 FAM110BQ8TC76 370 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 MIPOL1Q8TD10 442 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 GPR151Q8TDV0 419 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 C10orf82Q8WW14 230 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 NODALQ96S42 347 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 YIPF4Q9BSR8 244 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 SERHL2Q9H4I8 314 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 OLAHQ9NV23 265 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 CCDC167Q9P0B6 97 aa23.04■■□□□ 1.28
LSM6-202ENST00000502781 KRT16P08779 473 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 CD1EP15812 388 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 PTPN6P29350 595 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 KRT20P35900 424 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 DNASE1L1P49184 302 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 TDGF1P3P51864 188 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 MRPS22P82650 360 aaKnown RBP23.03■■□□□ 1.28
LSM6-202ENST00000502781 BICRALQ6AI39 1079 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 GK5Q6ZS86 529 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 GTF2H4Q92759 462 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 EFHD2Q96C19 240 aaPredicted RBP23.03■■□□□ 1.28
LSM6-202ENST00000502781 NEURL3Q96EH8 262 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 PHF12Q96QT6 1004 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 RMND5AQ9H871 391 aa23.03■■□□□ 1.28
LSM6-202ENST00000502781 MRTO4Q9UKD2 239 aaKnown RBP23.03■■□□□ 1.28
LSM6-202ENST00000502781 FAF1Q9UNN5 650 aaPredicted RBP23.03■■□□□ 1.28
LSM6-202ENST00000502781 CCDC154A6NI56 674 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 RFXANKO14593 260 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 GLSO94925 669 aaPredicted RBP23.02■■□□□ 1.28
LSM6-202ENST00000502781 IGKV1D-16P01601 117 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 ZCCHC18P0CG32 403 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 MST1P26927 711 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 IL12BP29460 328 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 PTGDSP41222 190 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 SEC24CP53992 1094 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 KCNK10P57789 538 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 SNTA1Q13424 505 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 IGFBP7Q16270 282 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 HYAL4Q2M3T9 481 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 AGKQ53H12 422 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 TRIML2Q8N7C3 387 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 JADE3Q92613 823 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 TMCO6Q96DC7 493 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 SPDL1Q96EA4 605 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 RMND5BQ96G75 393 aaPredicted RBP23.02■■□□□ 1.28
LSM6-202ENST00000502781 ITCHQ96J02 903 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 SLC6A13Q9NSD5 602 aa23.02■■□□□ 1.28
LSM6-202ENST00000502781 TRIM3O75382 744 aaPredicted RBP23.01■■□□□ 1.27
LSM6-202ENST00000502781 KCNK2O95069 426 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 KCNH1O95259 989 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 CYP4B1P13584 511 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 ZNF24P17028 368 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 CAPN3P20807 821 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 TRPC1P48995 793 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 PSMD4P55036 377 aaKnown RBP23.01■■□□□ 1.27
LSM6-202ENST00000502781 SF3A3Q12874 501 aaKnown RBP eCLIP23.01■■□□□ 1.27
LSM6-202ENST00000502781 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.01■■□□□ 1.27
LSM6-202ENST00000502781 GALNT11Q8NCW6 608 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 ADAMTS15Q8TE58 950 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 OTUB1Q96FW1 271 aaPredicted RBP23.01■■□□□ 1.27
LSM6-202ENST00000502781 SLC35A5Q9BS91 424 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 DOHHQ9BU89 302 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 BTBD2Q9BX70 525 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 TTTY12Q9BZ98 90 aa23.01■■□□□ 1.27
LSM6-202ENST00000502781 TUBA8Q9NY65 449 aaPredicted RBP23.01■■□□□ 1.27
LSM6-202ENST00000502781 VPS4AQ9UN37 437 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms