RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	VEZF1	Q14119	521 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SPIDR	Q14159	915 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SELPLG	Q14242	412 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MLC1	Q15049	377 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IGFBP7	Q16270	282 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FXN	Q16595	210 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NDUFA9	Q16795	377 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CYP51A1	Q16850	503 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NDUFAF5	Q5TEU4	345 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MRM1	Q6IN84	353 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ANKRD26P1	Q6NSI1	321 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LRRC74B	Q6ZQY2	392 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	VN1R4	Q7Z5H5	301 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SERPINA11	Q86U17	422 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TRIM73	Q86UV7	250 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CALHM3	Q86XJ0	350 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PLXDC1	Q8IUK5	500 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	EGFL6	Q8IUX8	553 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MSRB3	Q8IXL7	192 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MICU2	Q8IYU8	434 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CLECL1	Q8IZS7	167 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PQLC1	Q8N2U9	271 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ARL10	Q8N8L6	244 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR52E4	Q8NGH9	312 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR8K5	Q8NH50	307 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	UTP15	Q8TED0	518 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZFP90	Q8TF47	636 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SNRNP27	Q8WVK2	155 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NCSTN	Q92542	709 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FAM162A	Q96A26	154 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PPWD1	Q96BP3	646 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MOAP1	Q96BY2	351 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SMIM10	Q96HG1	83 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	REXO5	Q96IC2	774 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FAM210A	Q96ND0	272 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	BBS4	Q96RK4	519 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CCDC3	Q9BQI4	270 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NPL	Q9BXD5	320 aa	Predicted RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF717	Q9BY31	904 aa	Predicted RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CHRNA10	Q9GZZ6	450 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PIF1	Q9H611	641 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	KAT8	Q9H7Z6	458 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TPT1P8	Q9HAU6	139 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PDE7B	Q9NP56	450 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LHX9	Q9NQ69	397 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ARMC1	Q9NVT9	282 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PARPBP	Q9NWS1	579 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MS4A12	Q9NXJ0	267 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TAS2R7	Q9NYW3	318 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLC25A37	Q9NYZ2	338 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LRIT1	Q9P2V4	623 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SCOC	Q9UIL1	159 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ANAPC2	Q9UJX6	822 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PILRA	Q9UKJ1	303 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FBXW2	Q9UKT8	454 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	EXO1	Q9UQ84	846 aa	Known RBP	4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ENTPD4	Q9Y227	616 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LRCH1	Q9Y2L9	728 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ASB4	Q9Y574	426 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLC22A7	Q9Y694	548 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF780B	Q9Y6R6	833 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LRRK2	Q5S007	2527 aa		4.97	□□□□□ -1.61
HMGXB4-208	ENST00000498325	THADA	Q6YHU6	1953 aa		4.96	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325		A0A1B0GTQ1	180 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DHRS12	A0PJE2	317 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM247	A6NEH6	219 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TLCD2	A6NGC4	264 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC9B1P1	A6NJY1	282 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PDLIM1	O00151	329 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CASQ2	O14958	399 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PROM1	O43490	865 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DUX1	O43812	170 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PEX1	O43933	1283 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMPRSS11D	O60235	418 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CTSV	O60911	334 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ERAL1	O75616	437 aa	Known RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CREG1	O75629	220 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZBTB11	O95625	1053 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IFNA14	P01570	189 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PVR	P15151	417 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ST6GAL1	P15907	406 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NCK1	P16333	377 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HOXB9	P17482	250 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CSNK2A2	P19784	350 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ATP6V1B2	P21281	511 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CPN2	P22792	545 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAS	P25445	335 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CERS1	P27544	350 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PTPN6	P29350	595 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ALDH4A1	P30038	563 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MPI	P34949	423 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SOAT1	P35610	550 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FRK	P42685	505 aa	Predicted RBP	4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CRAT	P43155	626 aa		4.96	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAGEA8	P43361	318 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms