RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 NEIL2Q969S2 332 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 ANKRD9Q96BM1 317 aaPredicted RBP6.84□□□□□ -1.31
VPS45-210ENST00000497638 HIST1H2AHQ96KK5 128 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 ART5Q96L15 291 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 OR4K3Q96R72 315 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 HIST1H2AJQ99878 128 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 SLC39A3Q9BRY0 314 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 H2AFJQ9BTM1 129 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 PLA2G12AQ9BZM1 189 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 AICDAQ9GZX7 198 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 IFNKQ9P0W0 207 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 CLCF1Q9UBD9 225 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 MAD1L1Q9Y6D9 718 aa6.84□□□□□ -1.31
VPS45-210ENST00000497638 A0A0A6YYJ9 748 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 A0A0G2JN53 185 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 CTAGE15A4D2H0 777 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 CDH16O75309 829 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 DNAJC8O75937 253 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 ETHE1O95571 254 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 MBD3O95983 291 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 POU2F1P14859 743 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 TMED10P49755 219 aaKnown RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 NAGLUP54802 743 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 LIM2P55344 173 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 RPP38P78345 283 aaKnown RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 RBBP5Q15291 538 aaKnown RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 RPS6KA2Q15349 733 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 TOMM20Q15388 145 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 OASLQ15646 514 aaKnown RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 EIPR1Q53HC9 387 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 OR2A2Q6IF42 318 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 ZNF549Q6P9A3 640 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 BHLHB9Q6PI77 547 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 CES3Q6UWW8 571 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 DNM1P46Q6ZS02 220 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 SH2D5Q6ZV89 423 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 SLC29A4Q7RTT9 530 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 ZNF550Q7Z398 422 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 TMPRSS11BQ86T26 416 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 CTAGE6Q86UF2 777 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 GRAMD2AQ8IUY3 354 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 KLHDC8AQ8IYD2 350 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 TAGAPQ8N103 731 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 MYO1HQ8N1T3 1032 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 PYCR2Q96C36 320 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 MS4A6EQ96DS6 147 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 ZC3HAV1LQ96H79 300 aaKnown RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 SENP5Q96HI0 755 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 TMEM41AQ96HV5 264 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 FBXL20Q96IG2 436 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 RILPQ96NA2 401 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 TSNARE1Q96NA8 513 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 SERINC2Q96SA4 455 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 CSF3RQ99062 836 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 CPPED1Q9BRF8 314 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 FRMD8P1Q9BZ68 369 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 PITHD1Q9GZP4 211 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 SHARPINQ9H0F6 387 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 SLCO5A1Q9H2Y9 848 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 COPS7BQ9H9Q2 264 aaPredicted RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 SYBUQ9NX95 663 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 ARL15Q9NXU5 204 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 PAK5Q9P286 719 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 TRMT6Q9UJA5 497 aaKnown RBP6.83□□□□□ -1.32
VPS45-210ENST00000497638 DAPP1Q9UN19 280 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 MAPRE3Q9UPY8 281 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 LAMP3Q9UQV4 416 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 WIF1Q9Y5W5 379 aa6.83□□□□□ -1.32
VPS45-210ENST00000497638 LRIT2A6NDA9 550 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 KCNAB3O43448 404 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 HCRTR2O43614 444 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 LDB3O75112 727 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 SCAF4O95104 1147 aaKnown RBP6.82□□□□□ -1.32
VPS45-210ENST00000497638 NUDT3O95989 172 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 PPP3CBP16298 524 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 MGAT1P26572 445 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 CERS1P27544 350 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 HNRNPH1P31943 449 aaKnown RBP6.82□□□□□ -1.32
VPS45-210ENST00000497638 ACVR1BP36896 505 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 STT3AP46977 705 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 SLC6A12P48065 614 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 IGLV3-21P80748 117 aaPredicted RBP6.82□□□□□ -1.32
VPS45-210ENST00000497638 TGM3Q08188 693 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 FGFBP1Q14512 234 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 LIPNQ5VXI9 398 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 TIGD3Q6B0B8 471 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 UGT3A1Q6NUS8 523 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 TRIM40Q6P9F5 258 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 ZNF474Q6S9Z5 364 aaPredicted RBP6.82□□□□□ -1.32
VPS45-210ENST00000497638 LUZP1Q86V48 1076 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 CCDC89Q8N998 374 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 FAM83FQ8NEG4 500 aaPredicted RBP6.82□□□□□ -1.32
VPS45-210ENST00000497638 OR2L5Q8NG80 312 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 SPPL2AQ8TCT8 520 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 EEF1AKMT1Q8WVE0 214 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 ATG4AQ8WYN0 398 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 FBXL8Q96CD0 374 aa6.82□□□□□ -1.32
VPS45-210ENST00000497638 STARD4Q96DR4 205 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms