RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TSTQ16762 297 aaKnown RBP12.2□□□□□ -0.46
GARNL3-220ENST00000496711 TIMM50Q3ZCQ8 353 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF404Q494X3 552 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 SLC25A30Q5SVS4 291 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 TYW3Q6IPR3 259 aaKnown RBP12.2□□□□□ -0.46
GARNL3-220ENST00000496711 PLEKHM3Q6ZWE6 761 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 BTLAQ7Z6A9 289 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 PEX5LQ8IYB4 626 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CENPSQ8N2Z9 138 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 FAM26EQ8N5C1 309 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 TEX47Q8TBZ9 253 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 TSSK6Q9BXA6 273 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 RACGAP1Q9H0H5 632 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 DSN1Q9H410 356 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 ARMC7Q9H6L4 198 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CCDC59Q9P031 241 aaKnown RBP12.2□□□□□ -0.46
GARNL3-220ENST00000496711 MKLN1Q9UL63 735 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CYP8B1Q9UNU6 501 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 WDR45Q9Y484 360 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 SZT2Q5T011 3432 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 SPTY2D1-AS1A0A0U1RR47 76 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ATP1B1P05026 303 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 OCM2P0CE71 109 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 OCMP0CE72 109 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 GIPRP48546 466 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 LIMK1P53667 647 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TSPAN31Q12999 210 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 NCF4Q15080 339 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 DUSP5Q16690 384 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PUS10Q3MIT2 529 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF542PQ5EBM4 170 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 MANEAQ5SRI9 462 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 C19orf48Q6RUI8 117 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF730Q6ZMV8 503 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF836Q6ZNA1 936 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PRSS41Q7RTY9 318 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TAF8Q7Z7C8 310 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 OOSP2Q86WS3 158 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 CSNK1A1LQ8N752 337 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 AMER2Q8N7J2 671 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PIGXQ8TBF5 258 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TOE1Q96GM8 510 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 DACH2Q96NX9 599 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 CHCHD6Q9BRQ6 235 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PRR14Q9BWN1 585 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 MND1Q9BWT6 205 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TAPBPLQ9BX59 468 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PLA2G12AQ9BZM1 189 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 MMP27Q9H306 513 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF576Q9H609 170 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 GPR27Q9NS67 375 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 NDRG2Q9UN36 371 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 C19orf53Q9UNZ5 99 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 LSM2Q9Y333 95 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 A3GALT2U3KPV4 340 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TLX2O43763 284 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 FGF17O60258 216 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 GALR3O60755 368 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 CSO75390 466 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 UBXN7O94888 489 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 THEGLP0DJG4 465 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SOX18P35713 384 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SHC2P98077 582 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ID2Q02363 134 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 FZD2Q14332 565 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 LARS2Q15031 903 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 EIPR1Q53HC9 387 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SYT14P1Q58G82 188 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 RNLSQ5VYX0 342 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ACSM5Q6NUN0 579 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SLC27A4Q6P1M0 643 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 Q6ZS52 159 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 BCDIN3DQ7Z5W3 292 aaKnown RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ATCAYQ86WG3 371 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 TMEFF1Q8IYR6 380 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SLC34A3Q8N130 599 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 DRAXINQ8NBI3 349 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 SIMC1Q8NDZ2 872 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-220ENST00000496711 OPALINQ96PE5 141 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 MCHR1Q99705 422 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 CENPOQ9BU64 300 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 PIGUQ9H490 435 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 EGLN3Q9H6Z9 239 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 IL21RQ9HBE5 538 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF232Q9UNY5 417 aa12.19□□□□□ -0.46
GARNL3-220ENST00000496711 A0A087WV62 115 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 OR5K3A6NET4 321 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 H3BQ06 376 aaPredicted RBP12.18□□□□□ -0.46
GARNL3-220ENST00000496711 ARHGAP33O14559 1287 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 LDB3O75112 727 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms