RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GNGT1P63211 74 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 VPS26BQ4G0F5 336 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 CYP27C1Q4G0S4 372 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 SLC2A7Q6PXP3 512 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 BLOC1S3Q6QNY0 202 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 DNAJC14Q6Y2X3 702 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-212ENST00000495497 GK5Q6ZS86 529 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 ZNF621Q6ZSS3 439 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 NUP54Q7Z3B4 507 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 OR5D16Q8NGK9 328 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 GOT1L1Q8NHS2 421 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-212ENST00000495497 C10orf82Q8WW14 230 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 CDS1Q92903 461 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 MOAP1Q96BY2 351 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 RMND5BQ96G75 393 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-212ENST00000495497 SLC35A4Q96G79 324 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 BARD1Q99728 777 aaKnown RBP17.84■□□□□ 0.45
HDAC4-212ENST00000495497 ACTRT3Q9BYD9 372 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 FAM107BQ9H098 131 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 TSPAN10Q9H1Z9 355 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-212ENST00000495497 SLC6A13Q9NSD5 602 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 TUBA8Q9NY65 449 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-212ENST00000495497 CNIH4Q9P003 139 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 C2orf72A6NCS6 295 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 CCDC154A6NI56 674 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 OR6C70A6NIJ9 312 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 CYP4B1P13584 511 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 CASP3P42574 277 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 KCNK10P57789 538 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 MRPS22P82650 360 aaKnown RBP17.83■□□□□ 0.44
HDAC4-212ENST00000495497 DECR1Q16698 335 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 ZNF324BQ6AW86 544 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-212ENST00000495497 CDC73Q6P1J9 531 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 ZCCHC12Q6PEW1 402 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 FIGNL1Q6PIW4 674 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 DNAJB8Q8NHS0 232 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 SPDL1Q96EA4 605 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 SLC35G5Q96KT7 338 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 FAM173AQ9BQD7 235 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 SLC35A5Q9BS91 424 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 SLC52A3Q9NQ40 469 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 AGPAT4Q9NRZ5 378 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 RYDENQ9NUL5 291 aaKnown RBP17.83■□□□□ 0.44
HDAC4-212ENST00000495497 OLAHQ9NV23 265 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 FBXO34Q9NWN3 711 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 FAM53CQ9NYF3 392 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 FLRT3Q9NZU0 649 aa17.83■□□□□ 0.44
HDAC4-212ENST00000495497 FAF1Q9UNN5 650 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-212ENST00000495497 TTC36A6NLP5 189 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 RFXANKO14593 260 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 KCNH1O95259 989 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 CRYABP02511 175 aaKnown RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 CAPN3P20807 821 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 MATN1P21941 496 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 CHI3L1P36222 383 aaPredicted RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 PTGDSP41222 190 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 MAN2A2P49641 1150 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 PNLIPRP2P54317 469 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 KCNJ2P63252 427 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 FOXK1P85037 733 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 ALDH6A1Q02252 535 aaKnown RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 UBAP2LQ14157 1087 aaKnown RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 RCAN2Q14206 197 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 GTDC1Q4AE62 458 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 CCNJQ5T5M9 372 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 METTL21CQ5VZV1 264 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 SAXO2Q658L1 398 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 COX18Q8N8Q8 333 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 ADAMTS15Q8TE58 950 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 GTF2H4Q92759 462 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 JSRP1Q96MG2 331 aaPredicted RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 OR7D2Q96RA2 312 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 ELAC2Q9BQ52 826 aaKnown RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 ANGPTL4Q9BY76 406 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 PIGUQ9H490 435 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 RABEP2Q9H5N1 569 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 RMND5AQ9H871 391 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 METTL7AQ9H8H3 244 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 GALNT9Q9HCQ5 603 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 VPS4AQ9UN37 437 aa17.82■□□□□ 0.44
HDAC4-212ENST00000495497 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.82■□□□□ 0.44
HDAC4-212ENST00000495497 ZNF462Q96JM2 2506 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 FAM166BA8MTA8 275 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 ICOSLGO75144 302 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 KCNK2O95069 426 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 IL33O95760 270 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 ZNF24P17028 368 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 DRD4P21917 467 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 PSPHP78330 225 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 RPP38P78345 283 aaKnown RBP17.81■□□□□ 0.44
HDAC4-212ENST00000495497 IRX1P78414 480 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-212ENST00000495497 POU6F2P78424 691 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-212ENST00000495497 PLGLB1Q02325 96 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 LRRC74AQ0VAA2 488 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 FOXO1Q12778 655 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 PAGE3Q5JUK9 113 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 C6orf10Q5SRN2 563 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 BHLHB9Q6PI77 547 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 ANGPTL8Q6UXH0 198 aa17.81■□□□□ 0.44
HDAC4-212ENST00000495497 MSANTD1Q6ZTZ1 278 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms