RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CEP85LQ5SZL2 805 aa30.29■■■□□ 2.44
CBX4-203ENST00000494546 WDSUB1Q8N9V3 476 aa30.29■■■□□ 2.44
CBX4-203ENST00000494546 FAM83FQ8NEG4 500 aaPredicted RBP30.29■■■□□ 2.44
CBX4-203ENST00000494546 ZNF764Q96H86 408 aaPredicted RBP30.29■■■□□ 2.44
CBX4-203ENST00000494546 PPP3R2Q96LZ3 170 aa30.29■■■□□ 2.44
CBX4-203ENST00000494546 KCNJ16Q9NPI9 418 aa30.29■■■□□ 2.44
CBX4-203ENST00000494546 ITPR2Q14571 2701 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 A0A0G2JNJ9 132 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 PEX11AO75192 247 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 SKAP2O75563 359 aaPredicted RBP30.28■■■□□ 2.44
CBX4-203ENST00000494546 PSMG1O95456 288 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 BCKDHAP12694 445 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 ASMTP46597 345 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 ZNHIT3Q15649 155 aaPredicted RBP30.28■■■□□ 2.44
CBX4-203ENST00000494546 Q9UFV3 132 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 WIF1Q9Y5W5 379 aa30.28■■■□□ 2.44
CBX4-203ENST00000494546 TEX15Q9BXT5 2789 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 TBX19O60806 448 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 CBR3O75828 277 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 FREM3P0C091 2139 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 CYP4B1P13584 511 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 ADH7P40394 386 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 ZFP36L2P47974 494 aaKnown RBP30.27■■■□□ 2.44
CBX4-203ENST00000494546 MRPS22P82650 360 aaKnown RBP30.27■■■□□ 2.44
CBX4-203ENST00000494546 CYP27C1Q4G0S4 372 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 XKR7Q5GH72 579 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 VASNQ6EMK4 673 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 GDF7Q7Z4P5 450 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 EXOC3L1Q86VI1 746 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 OR6Y1Q8NGX8 325 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 ZFP28Q8NHY6 868 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 ZBED6CLQ96FA7 236 aaPredicted RBP30.27■■■□□ 2.44
CBX4-203ENST00000494546 C3orf30Q96M34 536 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 Q9N2J8 555 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 CAMK2AQ9UQM7 478 aa30.27■■■□□ 2.44
CBX4-203ENST00000494546 TMEM114B3SHH9 223 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 BMP7P18075 431 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 MAPK1P28482 360 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 MANFP55145 182 aaKnown RBP30.26■■■□□ 2.43
CBX4-203ENST00000494546 GAB1Q13480 694 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 PDE7AQ13946 482 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 ATP6AP1LQ52LC2 224 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 MEX3BQ6ZN04 569 aaKnown RBP30.26■■■□□ 2.43
CBX4-203ENST00000494546 PLCZ1Q86YW0 608 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 ABTB1Q969K4 478 aaPredicted RBP30.26■■■□□ 2.43
CBX4-203ENST00000494546 ZIM3Q96PE6 472 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 UGT2B28Q9BY64 529 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 EQTNQ9NQ60 294 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 CBLCQ9ULV8 474 aa30.26■■■□□ 2.43
CBX4-203ENST00000494546 AHRRA9YTQ3 701 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 FAM47E-STBD1D6RA91 191 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 TOXO94900 526 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 HSPA4LO95757 839 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 TUBBP07437 444 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 DECR1Q16698 335 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 NHSL2Q5HYW2 709 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 OR5M10Q6IEU7 315 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 PM20D2Q8IYS1 436 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 OR14L1PQ8NHC6 308 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 SPOCK3Q9BQ16 436 aa30.25■■■□□ 2.43
CBX4-203ENST00000494546 LMF2Q9BU23 707 aaKnown RBP30.25■■■□□ 2.43
CBX4-203ENST00000494546 SSU72Q9NP77 194 aaKnown RBP30.25■■■□□ 2.43
CBX4-203ENST00000494546 LYPLA1O75608 230 aaPredicted RBP30.24■■■□□ 2.43
CBX4-203ENST00000494546 IFI6P09912 130 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 EFNA1P20827 205 aaPredicted RBP30.24■■■□□ 2.43
CBX4-203ENST00000494546 GCKP35557 465 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 RFX3P48380 749 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 CHI3L2Q15782 390 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 ACSF3Q4G176 576 aaPredicted RBP30.24■■■□□ 2.43
CBX4-203ENST00000494546 DCST1Q5T197 706 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 RIPPLY2Q5TAB7 128 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 SZRD1Q7Z422 152 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 R3HCC1LQ7Z5L2 792 aaKnown RBP30.24■■■□□ 2.43
CBX4-203ENST00000494546 MTERF3Q96E29 417 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 C1orf50Q9BV19 199 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 TRIM8Q9BZR9 551 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 PRDM14Q9GZV8 571 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 ENKD1Q9H0I2 346 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 FBXL2Q9UKC9 423 aa30.24■■■□□ 2.43
CBX4-203ENST00000494546 ITM2AO43736 263 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 SCO2O43819 266 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 PRPS2P11908 318 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 GRK2P25098 689 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 EVI2BP34910 448 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 HPCAL1P37235 193 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 PRKAG1P54619 331 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 CES4AQ5XG92 561 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 RNF138Q8WVD3 245 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 OR2B2Q9GZK3 357 aa30.23■■■□□ 2.43
CBX4-203ENST00000494546 ACSS1Q9NUB1 689 aaPredicted RBP30.23■■■□□ 2.43
CBX4-203ENST00000494546 MRTO4Q9UKD2 239 aaKnown RBP30.23■■■□□ 2.43
CBX4-203ENST00000494546 GABRA3P34903 492 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 FRKP42685 505 aaPredicted RBP30.22■■■□□ 2.43
CBX4-203ENST00000494546 WNT3P56703 355 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 TFF3Q07654 80 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 C6orf136Q5SQH8 315 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 LRIG3Q6UXM1 1119 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 SEM1Q6ZVN7 128 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 ZNF295-AS1Q8N0V1 137 aa30.22■■■□□ 2.43
CBX4-203ENST00000494546 FNDC5Q8NAU1 212 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms