RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FAM234BA2RU67 622 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 NPIPA5E9PKD4 350 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 HS6ST1O60243 411 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 ABCB7O75027 752 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 GLSO94925 669 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-208ENST00000494334 WISP1O95388 367 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 ALOX5P09917 674 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TROVE2P10155 538 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL1A1-208ENST00000494334 ZNF24P17028 368 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 UQCRC2P22695 453 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 IL12BP29460 328 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 PTGDSP41222 190 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 ATP4BP51164 291 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 KCNJ2P63252 427 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL1A1-208ENST00000494334 DECR1Q16698 335 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TBCELQ5QJ74 424 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 CDC73Q6P1J9 531 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TMEM81Q6P7N7 255 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 BHLHB9Q6PI77 547 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 GK5Q6ZS86 529 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 C6orf120Q7Z4R8 191 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 FUNDC1Q8IVP5 155 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 ST6GALNAC3Q8NDV1 305 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 NTNG2Q96CW9 530 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TMCO6Q96DC7 493 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 OTUB1Q96FW1 271 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-208ENST00000494334 INPP5KQ9BT40 448 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 DOHHQ9BU89 302 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TMEM120AQ9BXJ8 343 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 ACTRT3Q9BYD9 372 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TTTY12Q9BZ98 90 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 TSPAN10Q9H1Z9 355 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-208ENST00000494334 PIGUQ9H490 435 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 IL1RL2Q9HB29 575 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 GIN1Q9NXP7 522 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 NPIPA1Q9UND3 350 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.42□□□□□ -0.42
COL1A1-208ENST00000494334 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
COL1A1-208ENST00000494334 RNF103-CHMP3A0A140T963 221 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 ANKUB1A6NFN9 424 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 TRIM3O75382 744 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 SNX4O95219 450 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 KCNH1O95259 989 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 IL33O95760 270 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 IGKV1D-16P01601 117 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 CYP4B1P13584 511 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 CD1EP15812 388 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 NCF2P19878 526 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 MATN1P21941 496 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 GNLYP22749 145 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 CDKN2CP42773 168 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 RFX3P48380 749 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 MAN2A2P49641 1150 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 ARFIP2P53365 341 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 PSMD4P55036 377 aaKnown RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 IRX1P78414 480 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 MRPS22P82650 360 aaKnown RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 PLGLB1Q02325 96 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 LRRC74AQ0VAA2 488 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 MRPL49Q13405 166 aaKnown RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 EFR3AQ14156 821 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 SQLEQ14534 574 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 HYAL4Q2M3T9 481 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 OR52N2Q8NGI0 321 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 FAM110BQ8TC76 370 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 ADAMTS15Q8TE58 950 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 JADE3Q92613 823 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 VPS33AQ96AX1 596 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 CHMP6Q96FZ7 201 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 RMND5BQ96G75 393 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 GPR137Q96N19 417 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 PANX1Q96RD7 426 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 STACQ99469 402 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 METTL7AQ9H8H3 244 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 SERHLQ9NQF3 203 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 DUSP22Q9NRW4 184 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 CCDC167Q9P0B6 97 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 MRTO4Q9UKD2 239 aaKnown RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 FAF1Q9UNN5 650 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-208ENST00000494334 KCNE3Q9Y6H6 103 aa12.41□□□□□ -0.42
COL1A1-208ENST00000494334 PRAMEF25A6NGN4 478 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 CCDC154A6NI56 674 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 LRRC3CA6NJW4 275 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 FAM166BA8MTA8 275 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 TFECO14948 347 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-208ENST00000494334 ASNA1O43681 348 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 ICOSLGO75144 302 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 KCNK2O95069 426 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 C1QCP02747 245 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 GSNP06396 782 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 KRT16P08779 473 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 RFPL3SP0C7P2 107 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 GYS2P54840 703 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 RPS26P62854 115 aaKnown RBP12.4□□□□□ -0.42
COL1A1-208ENST00000494334 PPIAP62937 165 aaKnown RBP12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SNTA1Q13424 505 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 RCAN2Q14206 197 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 TIGD2Q4W5G0 525 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms