RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 EMP2P54851 167 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CSNK1G2P78368 415 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CLCQ05315 142 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TRAF3Q13114 568 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 AQP6Q13520 282 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 FAM214AQ32MH5 1076 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 RFX4Q33E94 735 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF404Q494X3 552 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 SLC9B1Q4ZJI4 515 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 GRTP1Q5TC63 336 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 GARNL3Q5VVW2 1013 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 SHEQ5VZ18 495 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 STEAP4Q687X5 459 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TRMT10BQ6PF06 316 aaKnown RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PAQR3Q6TCH7 311 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CYP20A1Q6UW02 462 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 UBE2R2Q712K3 238 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 SAMD14Q8IZD0 417 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TCTE3Q8IZS6 198 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CLEC4FQ8N1N0 589 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 FBXO15Q8NCQ5 510 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PAPD5Q8NDF8 572 aaKnown RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 KBTBD8Q8NFY9 601 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 OR9A4Q8NGU2 314 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 DNAJB14Q8TBM8 379 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 GRHL3Q8TE85 626 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 FCGR1BQ92637 280 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 KCNJ9Q92806 393 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 MMABQ96EY8 250 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TAAR6Q96RI8 345 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 CSF3RQ99062 836 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 EBNA1BP2Q99848 306 aaKnown RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ATG10Q9H0Y0 220 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 SLC6A15Q9H2J7 730 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PPA2Q9H2U2 334 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 SPNS1Q9H2V7 528 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 KAT8Q9H7Z6 458 aaKnown RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TIGARQ9NQ88 270 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 SEMA3GQ9NS98 782 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TAS2R7Q9NYW3 318 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ACTR3BQ9P1U1 418 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PTGFRNQ9P2B2 879 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TRPC4Q9UBN4 977 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF282Q9UDV7 671 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-234ENST00000493923 KLHL21Q9UJP4 597 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 EMCNQ9ULC0 261 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 VWA7Q9Y334 891 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 PCDHGB3Q9Y5G1 929 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 DCHS2Q6V1P9 2916 aa7.64□□□□□ -1.19
HDAC6-234ENST00000493923 TACC2O95359 2948 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 GTF3C1Q12789 2109 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 AKAP9Q99996 3911 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 IGHV1-45A0A0A0MS14 117 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ATP6V1G2-DDX39BF2Z307 99 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TRIM77I1YAP6 450 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 SGK494L7N484 410 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 MRASO14807 208 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 UGT2B17O75795 530 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 HPP00738 406 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 IGHEP01854 428 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 AHSGP02765 367 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ALPPP05187 535 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 SNRPB2P08579 225 aaKnown RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 CD63P08962 238 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 GNAO1P09471 354 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 IL1RNP18510 177 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ATF4P18848 351 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 PAMP19021 973 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 PTX3P26022 381 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TYK2P29597 1187 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 HNF4AP41235 474 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ALDH3A2P51648 485 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 UGT2B15P54855 530 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 AP1S2P56377 157 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TBPL1P62380 186 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 MEF2AQ02078 507 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 MFAP5Q13361 173 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TNK1Q13470 666 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 BMPR2Q13873 1038 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 FRG1Q14331 258 aaKnown RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 GNA13Q14344 377 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ARHGAP19Q14CB8 494 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 COQ5Q5HYK3 327 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 STEAP3Q658P3 488 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 FCRLBQ6BAA4 426 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 REP15Q6BDI9 236 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TMEM205Q6UW68 189 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TMEM207Q6UWW9 146 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF782Q6ZMW2 699 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ADCK2Q7Z695 626 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 BTLAQ7Z6A9 289 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 KIF18BQ86Y91 864 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 FNDC5Q8NAU1 212 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 C2CD4AQ8NCU7 369 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ZNF740Q8NDX6 193 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 SETD9Q8NE22 299 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 TTLQ8NG68 377 aa7.63□□□□□ -1.19
HDAC6-234ENST00000493923 ZCCHC10Q8TBK6 192 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms