RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TACC2O95359 2948 aa11.27□□□□□ -0.6
UPF3A-210ENST00000493727 MYOCOSA0A1B0GUC4 107 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 A0A1W2PQ72 361 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 RNASET2O00584 256 aaKnown RBP11.27□□□□□ -0.61
UPF3A-210ENST00000493727 RFXANKO14593 260 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 AIM2O14862 343 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 HNRNPRO43390 633 aaKnown RBP11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ALOX12BO75342 701 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ANP32DO95626 131 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 C6orf47O95873 294 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 IFNA16P05015 189 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ABCB1P08183 1280 aaPredicted RBP11.27□□□□□ -0.61
UPF3A-210ENST00000493727 CPMP14384 443 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 CD1EP15812 388 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 PORP16435 677 aaPredicted RBP11.27□□□□□ -0.61
UPF3A-210ENST00000493727 MAOAP21397 527 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 NT5EP21589 574 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 CALB2P22676 271 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 MPIP34949 423 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ZFP36L2P47974 494 aaKnown RBP11.27□□□□□ -0.61
UPF3A-210ENST00000493727 NUDT2P50583 147 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 EMP2P54851 167 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 BTG2P78543 158 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 LRRC74AQ0VAA2 488 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 HSPB3Q12988 150 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 BIKQ13323 160 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ART3Q13508 389 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 NFYCQ13952 458 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 SERTAD2Q14140 314 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 INAQ16352 499 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF750Q32MQ0 723 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 SPDYE7PQ495Y7 208 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 SLC2A7Q6PXP3 512 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 TMEM151BQ8IW70 566 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 BCORP1Q8N888 145 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 GRHL3Q8TE85 626 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 FAR1Q8WVX9 515 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 OR5P2Q8WZ92 322 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 RCN3Q96D15 328 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 PLPPR2Q96GM1 343 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 DGAT2Q96PD7 388 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 PANX1Q96RD7 426 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 PELOQ9BRX2 385 aaKnown RBP11.27□□□□□ -0.61
UPF3A-210ENST00000493727 VN1R1Q9GZP7 353 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 IL1RL2Q9HB29 575 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF160Q9HCG1 818 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 TAS2R7Q9NYW3 318 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 CSAG2Q9Y5P2 127 aa11.27□□□□□ -0.61
UPF3A-210ENST00000493727 TRAV17A0A0B4J275 112 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 OR2W5A6NFC9 320 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 IDSB3KWA1 339 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 KCNH1O95259 989 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 F13BP05160 661 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 ICAM2P13598 275 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 TNNI3P19429 210 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 WNT3P56703 355 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 PHC1P78364 1004 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 ARG2P78540 354 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 RHAGQ02094 409 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 Q0VFX4 171 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 NSDHLQ15738 373 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 PRSS53Q2L4Q9 553 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 MPEG1Q2M385 716 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 COQ5Q5HYK3 327 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 FAAH2Q6GMR7 532 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 C6orf89Q6UWU4 347 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 SZRD1Q7Z422 152 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 DHDDSQ86SQ9 333 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 CLECL1Q8IZS7 167 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 OR9A2Q8NGT5 310 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 TSLPQ969D9 159 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 ANKRD9Q96BM1 317 aaPredicted RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 CNRIP1Q96F85 164 aaPredicted RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 RBM18Q96H35 190 aaKnown RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 CCDC115Q96NT0 180 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 ALOXE3Q9BYJ1 711 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 GLIPR2Q9H4G4 154 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 EFCAB1Q9HAE3 211 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 NECTIN3Q9NQS3 549 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 PNO1Q9NRX1 252 aaKnown RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 ACSS1Q9NUB1 689 aaPredicted RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 GID8Q9NWU2 228 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 C19orf25Q9UFG5 118 aaPredicted RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
UPF3A-210ENST00000493727 BTNL2Q9UIR0 455 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 SNX8Q9Y5X2 465 aa11.26□□□□□ -0.61
UPF3A-210ENST00000493727 A0A096LPI6 279 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 A0A1B0GUH1 482 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 A0A1W2PS29 197 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ASPDHA6ND91 283 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 MYO1GB0I1T2 1018 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 FBP2O00757 339 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ATP5HO75947 161 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 PF4P02776 101 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 SERPINA7P05543 415 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 SLC35E2P0CK97 266 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 COX6A1P12074 109 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms