RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PMM1Q92871 262 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 CDS1Q92903 461 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 SGCZQ96LD1 299 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 CNTNAP3BQ96NU0 1288 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 UTP23Q9BRU9 249 aaKnown RBP10.67□□□□□ -0.7
LSM2-214ENST00000493387 CNTNAP3Q9BZ76 1288 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 ADNPQ9H2P0 1102 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 SERHL2Q9H4I8 314 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 TMEM38AQ9H6F2 299 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 KAT8Q9H7Z6 458 aaKnown RBP10.67□□□□□ -0.7
LSM2-214ENST00000493387 SPAG4Q9NPE6 437 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 P2RX2Q9UBL9 471 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 TUBD1Q9UJT1 453 aa10.67□□□□□ -0.7
LSM2-214ENST00000493387 DOCK10Q96BY6 2186 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 AKAP13Q12802 2813 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 OR6C70A6NIJ9 312 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 HMGN4O00479 90 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 TP53I11O14683 189 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 NME6O75414 186 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 TNFRSF21O75509 655 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 REM1O75628 298 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 PPM1BO75688 479 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 KCNK2O95069 426 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 NADKO95544 446 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 IL33O95760 270 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 FBXO45P0C2W1 286 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 NR2F1P10589 423 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 ETFAP13804 333 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 ABCD3P28288 659 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 IL12BP29460 328 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 CYB561P49447 251 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 PNLIPRP2P54317 469 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 POLE2P56282 527 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 EEFSECP57772 596 aaKnown RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 MTPNP58546 118 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 HPCAP84074 193 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 NNATQ16517 81 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 CYP51A1Q16850 503 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.66□□□□□ -0.7
LSM2-214ENST00000493387 ZNF630Q2M218 657 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 DNAL1Q4LDG9 190 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 PRAMEF8Q5VWM4 474 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 PRAMEF7Q5VXH5 474 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 HEPHL1Q6MZM0 1159 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 ERICH5Q6P6B1 374 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 IGFL2Q6UWQ7 119 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 NUP54Q7Z3B4 507 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 WDR53Q7Z5U6 358 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 NET1Q7Z628 596 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 SLC15A3Q8IY34 581 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 BEST3Q8N1M1 668 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 BCORP1Q8N888 145 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 C11orf65Q8NCR3 313 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 RBM15BQ8NDT2 890 aaKnown RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 TNIP2Q8NFZ5 429 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 OR5D16Q8NGK9 328 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 FBXO30Q8TB52 745 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 FAM110BQ8TC76 370 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 OIT3Q8WWZ8 545 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 PIK3R3Q92569 461 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 TTC9Q92623 222 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 DIO2Q92813 273 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 HAS2Q92819 552 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 RAB8BQ92930 207 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 TMBIM1Q969X1 311 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 TMEM125Q96AQ2 219 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 SPACA9Q96E40 222 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 OMA1Q96E52 524 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 RMND5BQ96G75 393 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 COL21A1Q96P44 957 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 TRNT1Q96Q11 434 aaKnown RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 SECISBP2Q96T21 854 aaKnown RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 SLC39A3Q9BRY0 314 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 HOXD1Q9GZZ0 328 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 TRIM45Q9H8W5 580 aaPredicted RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 LIN28AQ9H9Z2 209 aaKnown RBP10.66□□□□□ -0.7
LSM2-214ENST00000493387 HHATLQ9HCP6 504 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 A4GALTQ9NPC4 353 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 HPF1Q9NWY4 346 aa10.66□□□□□ -0.7
LSM2-214ENST00000493387 GXYLT2A0PJZ3 443 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 C5orf58C9J3I9 102 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 GYG2O15488 501 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 TSPAN2O60636 221 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 STX11O75558 287 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 SFTPCP11686 197 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 CPOXP36551 454 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 SOX3P41225 446 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 SLC7A2P52569 658 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 CRISP3P54108 245 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 CASP9P55211 416 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 OC90Q02509 493 aaPredicted RBP10.65□□□□□ -0.7
LSM2-214ENST00000493387 NTRK2Q16620 822 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 ST3GAL2Q16842 350 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 ZNF791Q3KP31 576 aaPredicted RBP10.65□□□□□ -0.7
LSM2-214ENST00000493387 GPAT3Q53EU6 434 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 RABL3Q5HYI8 236 aa10.65□□□□□ -0.7
LSM2-214ENST00000493387 SAMD4BQ5PRF9 694 aaKnown RBP10.65□□□□□ -0.7
LSM2-214ENST00000493387 DCST2Q5T1A1 773 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms