RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 MRPS11P82912 194 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ARHGAP1Q07960 439 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PJVKQ0ZLH3 352 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 BAMBIQ13145 260 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SLC39A6Q13433 755 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FGFBP1Q14512 234 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PTGR1Q14914 329 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TNXAQ16473 311 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF750Q32MQ0 723 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 POM121L1PQ3SYA9 428 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TIGD2Q4W5G0 525 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 C6orf226Q5I0X4 101 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 LRRC73Q5JTD7 316 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF544Q6NX49 715 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NIPAL3Q6P499 406 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 EMBQ6PCB8 327 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ABHD15Q6UXT9 468 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SIGLEC15Q6ZMC9 328 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DPY19L3Q6ZPD9 716 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 UBE3DQ7Z6J8 389 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 LDB1Q86U70 411 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 LAX1Q8IWV1 398 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NRMQ8IXM6 262 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IFT20Q8IY31 132 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KIF2BQ8N4N8 673 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 BEND7Q8N7W2 519 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CDYL2Q8N8U2 506 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 EXD3Q8N9H8 876 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KIAA0895Q8NCT3 520 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 BHLHE22Q8NFJ8 381 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 B3GNT7Q8NFL0 401 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 OR1L4Q8NGR5 311 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IGDCC4Q8TDY8 1250 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ABHD5Q8WTS1 349 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ASB15Q8WXK1 588 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CDS1Q92903 461 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 WBP2Q969T9 261 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PPWD1Q96BP3 646 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 OTUB1Q96FW1 271 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MUS81Q96NY9 551 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MCCC1Q96RQ3 725 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PFDN5Q99471 154 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF426Q9BUY5 554 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MRI1Q9BV20 369 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 C1QTNF1Q9BXJ1 281 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MAP1LC3CQ9BXW4 147 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ULBP1Q9BZM6 244 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NRSN2Q9GZP1 204 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SPATC1LQ9H0A9 340 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DUSP15Q9H1R2 295 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PPIL3Q9H2H8 161 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KCNK15Q9H427 330 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FN3KQ9H479 309 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SMYD3Q9H7B4 428 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SIAEQ9HAT2 523 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 UGT1A7Q9HAW7 530 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 UGT1A10Q9HAW8 530 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 UGT1A8Q9HAW9 530 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 Q9N2J8 555 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KRCC1Q9NPI7 259 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ENTPD7Q9NQZ7 604 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PLEKHJ1Q9NW61 149 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GAR1Q9NY12 217 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GPR83Q9NYM4 423 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PRR13Q9NZ81 148 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DNMT3BQ9UBC3 853 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 COPS7AQ9UBW8 275 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 RAB21Q9UL25 225 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 A4GNTQ9UNA3 340 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SORCS3Q9UPU3 1222 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GSTK1Q9Y2Q3 226 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 POLR3HQ9Y535 204 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 LRP12Q9Y561 859 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IRAK3Q9Y616 596 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MSH6P52701 1360 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CEP162Q5TB80 1403 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SNED1Q8TER0 1413 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 WNK3Q9BYP7 1800 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SPEF2Q9C093 1822 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FAM172BPA6NC97 362 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FAM90A10PA6NDY2 464 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PDHXO00330 501 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TEX33O43247 280 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 OR1F1O43749 312 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SRPX2O60687 465 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CCDC22O60826 627 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SLC25A12O75746 678 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TSPAN12O95859 305 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GOT2P00505 430 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TFP02787 698 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SBK3P0C264 359 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KCNE1P15382 129 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 EDN2P20800 178 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SDHBP21912 280 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 COMTP21964 271 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 STOMP27105 288 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 RBMS1P29558 406 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ECHS1P30084 290 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 HSPA9P38646 679 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KIR3DL1P43629 444 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms