RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NDUFV2P19404 249 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 SERPINB1P30740 379 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 MPIP34949 423 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 GSTM5P46439 218 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 LIMK1P53667 647 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 TGM3Q08188 693 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 C1orf61Q13536 156 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 EXOSC7Q15024 291 aaKnown RBP11.65□□□□□ -0.54
HMGN1-220ENST00000492280 DUSP5Q16690 384 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 ENTPD8Q5MY95 495 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 C22orf42Q6IC83 251 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 PLEKHM3Q6ZWE6 761 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 USP30Q70CQ3 517 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 ASPGQ86U10 573 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 OR4F15Q8NGB8 312 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 GPR151Q8TDV0 419 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 TM9SF4Q92544 642 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 MRGPRX1Q96LB2 322 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 DCLRE1CQ96SD1 692 aaKnown RBP11.65□□□□□ -0.54
HMGN1-220ENST00000492280 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.54
HMGN1-220ENST00000492280 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 RACGAP1Q9H0H5 632 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 CNOT2Q9NZN8 540 aaKnown RBP11.65□□□□□ -0.54
HMGN1-220ENST00000492280 ANKMY1Q9P2S6 941 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 SPIN1Q9Y657 262 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-220ENST00000492280 CSNK1G3Q9Y6M4 447 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 CACNA1CQ13936 2221 aa11.65□□□□□ -0.54
HMGN1-220ENST00000492280 MPDZO75970 2070 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 SLC35F4A4IF30 521 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 PEX12O00623 359 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 DVL2O14641 736 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 KCNK2O95069 426 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 UGT2B7P16662 529 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 CSTF2P33240 577 aaKnown RBP eCLIP11.65□□□□□ -0.55
HMGN1-220ENST00000492280 AHRP35869 848 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 UGT2B10P36537 528 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 NKX2-5P52952 324 aaPredicted RBP11.65□□□□□ -0.55
HMGN1-220ENST00000492280 SNRPGP62308 76 aaKnown RBP11.65□□□□□ -0.55
HMGN1-220ENST00000492280 CBX3Q13185 183 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 MLC1Q15049 377 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 MAPK14Q16539 360 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 FBXO43Q4G163 708 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 FIGNL1Q6PIW4 674 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 NRROSQ86YC3 692 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 EGFL6Q8IUX8 553 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 CELF2-AS1Q8N7Q2 184 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 NLGN4YQ8NFZ3 816 aaPredicted RBP11.65□□□□□ -0.55
HMGN1-220ENST00000492280 OR56A1Q8NGH5 318 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 OR52P1PQ8NH57 321 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 RPLP0P6Q8NHW5 317 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 HMGB4Q8WW32 186 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 RASSF5Q8WWW0 418 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 ELSPBP1Q96BH3 223 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 ART5Q96L15 291 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 RAB11FIP5Q9BXF6 653 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 KIR3DX1Q9H7L2 352 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 ENOPH1Q9UHY7 261 aa11.65□□□□□ -0.55
HMGN1-220ENST00000492280 WBP11Q9Y2W2 641 aaKnown RBP11.65□□□□□ -0.55
HMGN1-220ENST00000492280 GPR89AB7ZAQ6 455 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 CDC42EP2O14613 210 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 OXSR1O95747 527 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 LALBAP00709 142 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 CCNYL3P0C7X3 344 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 GPR89BP0CG08 455 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TYRP1P17643 537 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 RPS25P62851 125 aaKnown RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TRA2BP62995 288 aaKnown RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TUBA1BP68363 451 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 FCRLBQ6BAA4 426 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SMARCD3Q6STE5 483 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 HSDL2Q6YN16 418 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 FRRS1Q6ZNA5 592 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TUBA1AQ71U36 451 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF614Q8N883 585 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 OR4Q3Q8NH05 313 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 NACC2Q96BF6 587 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 MED20Q9H944 212 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 RBMX2Q9Y388 322 aaKnown RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 PRKNO60260 465 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 MPZL2O60487 215 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 CDC123O75794 336 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SCG5P05408 212 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 ACADMP11310 421 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SSTR4P31391 388 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 CRYBB2P43320 205 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TPTEP56180 551 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 STXBP1P61764 594 aaKnown RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SHC2P98077 582 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 CSTF1Q05048 431 aaKnown RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TAB1Q15750 504 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 FCRL6Q6DN72 434 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SDE2Q6IQ49 451 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 C1orf94Q6P1W5 598 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 FLVCR1-AS1Q8TAF5 88 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 TEX47Q8TBZ9 253 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SMAP2Q8WU79 429 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 FAM3CQ92520 227 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 DIO2Q92813 273 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 RNFT2Q96EX2 444 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms