RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 CRYBG3Q68DQ2 2970 aa13.77□□□□□ -0.2
USP39-217ENST00000491659 WDR91A4D1P6 747 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 C2orf72A6NCS6 295 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 C19orf84I3L1E1 186 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 TM9SF1O15321 606 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 ZWINTO95229 277 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 PSMG1O95456 288 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 GLI4P10075 376 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 ARRB2P32121 409 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 RPL3P39023 403 aaKnown RBP13.77□□□□□ -0.21
USP39-217ENST00000491659 PSG6Q00889 435 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 CRYZQ08257 329 aaKnown RBP13.77□□□□□ -0.21
USP39-217ENST00000491659 PDE7AQ13946 482 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.21
USP39-217ENST00000491659 DECR1Q16698 335 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 CYP27C1Q4G0S4 372 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 ZNF385BQ569K4 471 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 WIPI1Q5MNZ9 446 aaPredicted RBP13.77□□□□□ -0.21
USP39-217ENST00000491659 RTL6Q6ICC9 239 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 LRIG3Q6UXM1 1119 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 ZNF551Q7Z340 670 aaPredicted RBP13.77□□□□□ -0.21
USP39-217ENST00000491659 SZRD1Q7Z422 152 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 GDF7Q7Z4P5 450 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 EXOC3L1Q86VI1 746 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.21
USP39-217ENST00000491659 MCEMP1Q8IX19 187 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 PM20D2Q8IYS1 436 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 ULK2Q8IYT8 1036 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 FAM83FQ8NEG4 500 aaPredicted RBP13.77□□□□□ -0.21
USP39-217ENST00000491659 OR4N2Q8NGD1 307 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 SERHLQ9NQF3 203 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 BAIAP2L1Q9UHR4 511 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 ZDHHC2Q9UIJ5 367 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 CBLCQ9ULV8 474 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 SLC6A5Q9Y345 797 aa13.77□□□□□ -0.21
USP39-217ENST00000491659 HCFC1P51610 2035 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 SCAMP2O15127 329 aaKnown RBP13.76□□□□□ -0.21
USP39-217ENST00000491659 BIRC5O15392 142 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 PEX11AO75192 247 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 CBR3O75828 277 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 SERPINE1P05121 402 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 PRPS2P11908 318 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 BCKDHAP12694 445 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 ZFP36L2P47974 494 aaKnown RBP13.76□□□□□ -0.21
USP39-217ENST00000491659 PSMD4P55036 377 aaKnown RBP13.76□□□□□ -0.21
USP39-217ENST00000491659 MANFP55145 182 aaKnown RBP13.76□□□□□ -0.21
USP39-217ENST00000491659 CHI3L2Q15782 390 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 EIPR1Q53HC9 387 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 PLCZ1Q86YW0 608 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 FNDC5Q8NAU1 212 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 OR6Y1Q8NGX8 325 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 LILRB4Q8NHJ6 448 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 LMF2Q9BU23 707 aaKnown RBP13.76□□□□□ -0.21
USP39-217ENST00000491659 C1orf50Q9BV19 199 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 KCNJ16Q9NPI9 418 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 EQTNQ9NQ60 294 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 ACSS1Q9NUB1 689 aaPredicted RBP13.76□□□□□ -0.21
USP39-217ENST00000491659 GIMAP2Q9UG22 337 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 DKKL1Q9UK85 242 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 CAMK2AQ9UQM7 478 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 ACTL7BQ9Y614 415 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 CELSR2Q9HCU4 2923 aa13.76□□□□□ -0.21
USP39-217ENST00000491659 NKX2-6A6NCS4 301 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 AHRRA9YTQ3 701 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 ERLIN1O75477 346 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 LYPLA1O75608 230 aaPredicted RBP13.75□□□□□ -0.21
USP39-217ENST00000491659 KCNH1O95259 989 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 CYP4B1P13584 511 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 BMP7P18075 431 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 EVI2BP34910 448 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 FRKP42685 505 aaPredicted RBP13.75□□□□□ -0.21
USP39-217ENST00000491659 RFX3P48380 749 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 MAD2L1Q13257 205 aaPredicted RBP13.75□□□□□ -0.21
USP39-217ENST00000491659 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 RIPPLY2Q5TAB7 128 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 VASNQ6EMK4 673 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 WDR53Q7Z5U6 358 aaPredicted RBP13.75□□□□□ -0.21
USP39-217ENST00000491659 YRDCQ86U90 279 aaKnown RBP13.75□□□□□ -0.21
USP39-217ENST00000491659 WDSUB1Q8N9V3 476 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 OR14L1PQ8NHC6 308 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 CEP70Q8NHQ1 597 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 ABTB1Q969K4 478 aaPredicted RBP13.75□□□□□ -0.21
USP39-217ENST00000491659 TUBGCP3Q96CW5 907 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 PGM2Q96G03 612 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 C3orf30Q96M34 536 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 MS4A4EQ96PG1 132 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 TIMP4Q99727 224 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 UGT2B28Q9BY64 529 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 OR2B2Q9GZK3 357 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 PRDM14Q9GZV8 571 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 KCNK9Q9NPC2 374 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 PPP4R1LQ9P1A2 415 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 ATP6V1HQ9UI12 483 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 ABCG2Q9UNQ0 655 aa13.75□□□□□ -0.21
USP39-217ENST00000491659 A0A0G2JNJ9 132 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 SCO2O43819 266 aa13.74□□□□□ -0.21
USP39-217ENST00000491659 SNUPNO95149 360 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms