RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CLDN14O95500 239 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 MLYCDO95822 493 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 EIF2S1P05198 315 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PTMAP06454 111 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 HEXBP07686 556 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 CYC1P08574 325 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ANXA5P08758 320 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ERVK-10P10266 1014 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ERGP11308 486 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 RPS3P23396 243 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PSMB5P28074 263 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 CMPK1P30085 196 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SSTR2P30874 369 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 GRK5P34947 590 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 CYLC1P35663 651 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 HSD17B2P37059 387 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 FDFT1P37268 417 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC26A3P40879 764 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SMSP52788 366 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 NAP1L1P55209 391 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ARF3P61204 181 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PRAMEP78395 509 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ADORA2A-AS1P86434 159 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PRDX1Q06830 199 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 FAM53BQ14153 422 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ARHGAP19Q14CB8 494 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 LONRF1Q17RB8 773 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 KRTAP21-3Q3LHN1 58 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ANKRD20A4Q4UJ75 823 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF766Q5HY98 468 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PTRHD1Q6GMV3 140 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 AADACL2Q6P093 401 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 LRRC8BQ6P9F7 803 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM88Q6PEY1 159 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PPP1R21Q6ZMI0 780 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 Q6ZPB1 254 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 OTOAQ7RTW8 1153 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PAQR7Q86WK9 346 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PRSS58Q8IYP2 241 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 KRT222Q8N1A0 295 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 UBL4BQ8N7F7 174 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 AMER3Q8N944 861 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 LKAAEAR1Q8TD35 194 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 METTL21AQ8WXB1 218 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SMPDL3AQ92484 453 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 MMABQ96EY8 250 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 C14orf79Q96F83 325 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 CABS1Q96KC9 395 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF354BQ96LW1 612 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 OR2A5Q96R48 311 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 NODALQ96S42 347 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM121Q9BTD3 319 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 DPH7Q9BTV6 452 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF700Q9H0M5 742 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 P2RY12Q9H244 342 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 CCDC134Q9H6E4 229 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 Q9N2J8 555 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 MRPS30Q9NP92 439 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 NECTIN3Q9NQS3 549 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ARL15Q9NXU5 204 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SPATA7Q9P0W8 599 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 TRPC4Q9UBN4 977 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC2A6Q9UGQ3 507 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 CIDEBQ9UHD4 219 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 GNPTGQ9UJJ9 305 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ANAPC5Q9UJX4 755 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 R3HDM2Q9Y2K5 976 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF835Q9Y2P0 537 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 NFS1Q9Y697 457 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ZFHX3Q15911 3703 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 MPDZO75970 2070 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 ACANP16112 2415 aa3.69□□□□□ -1.82
SNRNP40-205ENST00000486941 PRRC2AP48634 2157 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 ANKHD1Q8IWZ3 2542 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 A0A0A6YYC8 382 aaPredicted RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 IGKV1-8A0A0C4DH67 115 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 PLSCR5A0PG75 271 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 ASPDHA6ND91 283 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 A8MUI8 341 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 E7EVH7 732 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 H0YIG0 161 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 H3BMM5 538 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 I3L1I5 382 aaPredicted RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 AP3B1O00203 1094 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 TTI1O43156 1089 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 NDUFS3O75489 264 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 KRT38O76015 456 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 WISP2O76076 250 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 CCNDBP1O95273 360 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 IPO7O95373 1038 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 F10P00742 488 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 CGAP01215 116 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 UQCRHP07919 91 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 SNRNP70P08621 437 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 C8orf89P0DMQ9 161 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 EZRP15311 586 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 PTMSP20962 102 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 TNFSF4P23510 183 aa3.68□□□□□ -1.82
SNRNP40-205ENST00000486941 HRH2P25021 359 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms