RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 CCT3P49368 545 aaKnown RBP12.06□□□□□ -0.48
SF1-216ENST00000486867 MAN2A2P49641 1150 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 IDH3AP50213 366 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 GAS1P54826 345 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 UFM1P61960 85 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 IRX1P78414 480 aaPredicted RBP12.06□□□□□ -0.48
SF1-216ENST00000486867 GAB1Q13480 694 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 EFR3AQ14156 821 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 ZNHIT3Q15649 155 aaPredicted RBP12.06□□□□□ -0.48
SF1-216ENST00000486867 VPS26BQ4G0F5 336 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 SPANXN4Q5MJ08 99 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 ANXA8L1Q5VT79 327 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 PRAMEF20Q5VT98 475 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 DESI1Q6ICB0 168 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 SLC30A6Q6NXT4 461 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 FGD2Q7Z6J4 655 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 SLC22A16Q86VW1 577 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 GHDCQ8N2G8 530 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 FAM109AQ8N4B1 249 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 ARFGAP2Q8N6H7 521 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 TMEM251Q8N6I4 163 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 OR4N2Q8NGD1 307 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 OR56A1Q8NGH5 318 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 RILPQ96NA2 401 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 CCDC115Q96NT0 180 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 NODALQ96S42 347 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 STACQ99469 402 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 UBQLN3Q9H347 655 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 CCDC134Q9H6E4 229 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 ZNF703Q9H7S9 590 aaPredicted RBP12.06□□□□□ -0.48
SF1-216ENST00000486867 Q9N2J8 555 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 TMEM45AQ9NWC5 275 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 BTNL2Q9UIR0 455 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 CBLCQ9ULV8 474 aa12.06□□□□□ -0.48
SF1-216ENST00000486867 BOKQ9UMX3 212 aaPredicted RBP12.06□□□□□ -0.48
SF1-216ENST00000486867 WIPF3A6NGB9 483 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 NPIPA5E9PKD4 350 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 G3V3Y1 287 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ACOT7O00154 380 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 TFECO14948 347 aaPredicted RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 HS6ST1O60243 411 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 UNC5CO95185 931 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 HMGN2P05204 90 aaKnown RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 NGFRP08138 427 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 LCN1P31025 176 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 RFC3P40938 356 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 KCNK10P57789 538 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 PPIAP62937 165 aaKnown RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 KCNJ2P63252 427 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 MRPS22P82650 360 aaKnown RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 LRRC74AQ0VAA2 488 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ELOAQ14241 798 aaKnown RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 EIF2S3LQ2VIR3 472 aaKnown RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 PGS1Q32NB8 556 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 FAM174BQ3ZCQ3 159 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 TMEM198Q66K66 360 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 BICRALQ6AI39 1079 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 CDC73Q6P1J9 531 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 GFRALQ6UXV0 394 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 MSANTD1Q6ZTZ1 278 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ACAD11Q709F0 780 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 CLECL1Q8IZS7 167 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 SLC16A11Q8NCK7 471 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 OR52N2Q8NGI0 321 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 OR5M3Q8NGP4 307 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 MIPOL1Q8TD10 442 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 RELTQ969Z4 430 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 MAGED4Q96JG8 741 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ZNF597Q96LX8 424 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 EBF4Q9BQW3 602 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 DOHHQ9BU89 302 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ACKR4Q9NPB9 350 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 TCF7L2Q9NQB0 619 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ZCCHC3Q9NUD5 404 aaKnown RBP12.05□□□□□ -0.48
SF1-216ENST00000486867 NPIPA1Q9UND3 350 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 ABCG2Q9UNQ0 655 aa12.05□□□□□ -0.48
SF1-216ENST00000486867 PRAMEF25A6NGN4 478 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 SNPHO15079 494 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 UBDO15205 165 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 SUSD5O60279 629 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 FADS1O60427 444 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 DIAPH2O60879 1101 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 ICOSLGO75144 302 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 REM1O75628 298 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 IGKV1D-16P01601 117 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 PGRP06401 933 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 KRT16P08779 473 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 RFPL3SP0C7P2 107 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 CYP4B1P13584 511 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 ELAVL4P26378 380 aaKnown RBP12.04□□□□□ -0.48
SF1-216ENST00000486867 S100A3P33764 101 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 GABRA3P34903 492 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 PRIM2P49643 509 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 DUSP5Q16690 384 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 DECR1Q16698 335 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.04□□□□□ -0.48
SF1-216ENST00000486867 C4orf17Q53FE4 359 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 HSP90B2PQ58FF3 399 aa12.04□□□□□ -0.48
SF1-216ENST00000486867 TIGD3Q6B0B8 471 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms