RNA–Protein interactions for RNA: ENST00000486144.1

SERF2-216, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-216	ENST00000486144	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.18	□□□□□ -0.62
SERF2-216	ENST00000486144	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.18	□□□□□ -0.62
SERF2-216	ENST00000486144	NPFFR2	Q9Y5X5	522 aa		11.18	□□□□□ -0.62
SERF2-216	ENST00000486144	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.18	□□□□□ -0.62
SERF2-216	ENST00000486144	OTOG	Q6ZRI0	2925 aa		11.18	□□□□□ -0.62
SERF2-216	ENST00000486144	PKDREJ	Q9NTG1	2253 aa		11.18	□□□□□ -0.62
SERF2-216	ENST00000486144		A0A087WV62	115 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	ANKRD65	E5RJM6	399 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CCL21	O00585	134 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	GYG2	O15488	501 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	ZNHIT1	O43257	154 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CT45A8	P0DMV1	189 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CT45A9	P0DMV2	189 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	T-ENOL	P0DO92	83 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PRPS1L1	P21108	318 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PIGA	P37287	484 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CA7	P43166	264 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PPIC	P45877	212 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	DNASE1L1	P49184	302 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	MANF	P55145	182 aa	Known RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	C21orf58	P58505	322 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PSG6	Q00889	435 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	NTRK2	Q16620	822 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CT45A2	Q5DJT8	189 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PRAMEF20	Q5VT98	475 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	TMEM198	Q66K66	360 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	BICRAL	Q6AI39	1079 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	NXN	Q6DKJ4	435 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	XKRX	Q6PP77	449 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	MRGPRG	Q86SM5	289 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	SIAH3	Q8IW03	269 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	TAGAP	Q8N103	731 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	GOLM1	Q8NBJ4	401 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	FAM13C	Q8NE31	585 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	C17orf47	Q8NEP4	570 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	OR2M7	Q8NG81	312 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	OR4N2	Q8NGD1	307 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PAQR8	Q8TEZ7	354 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	COQ8B	Q96D53	544 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CCDC120	Q96HB5	630 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	LCOR	Q96JN0	433 aa	Predicted RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	MARK4	Q96L34	752 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	TEX37	Q96LM6	180 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	BTBD9	Q96Q07	612 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	OR52B2	Q96RD2	323 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	TIMMDC1	Q9NPL8	285 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	ARL8B	Q9NVJ2	186 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	DDX18	Q9NVP1	670 aa	Known RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	AIG1	Q9NVV5	245 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	TMEM45A	Q9NWC5	275 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	PRODH2	Q9UF12	536 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CNOT11	Q9UKZ1	510 aa	Known RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	CFL2	Q9Y281	166 aa		11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	ANKRD17	O75179	2603 aa	Known RBP	11.17	□□□□□ -0.62
SERF2-216	ENST00000486144	POLQ	O75417	2590 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	FRG2C	A6NGY1	282 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144		C9JVG2	144 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144		E9PBE3	544 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	T	O15178	435 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	ERN1	O75460	977 aa	Known RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	BCAS2	O75934	225 aa	Predicted RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	C6orf47	O95873	294 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	COX6B1	P14854	86 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	AGA	P20933	346 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	CNR1	P21554	472 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	DRD5	P21918	477 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	HTR1E	P28566	365 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	IL12A	P29459	219 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	GPC1	P35052	558 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	NME5	P56597	212 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	WNT3	P56703	355 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	RIPPLY3	P57055	190 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	STX1B	P61266	288 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	UFM1	P61960	85 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	PHC1	P78364	1004 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	SQLE	Q14534	574 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	ZNF630	Q2M218	657 aa	Predicted RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	LSM12	Q3MHD2	195 aa	Known RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	CPTP	Q5TA50	214 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	OR4F3	Q6IEY1	312 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	CAMKMT	Q7Z624	323 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	ZFP62	Q8NB50	900 aa	Predicted RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	RP9	Q8TA86	221 aa	Known RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	HGD	Q93099	445 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	MCUR1	Q96AQ8	359 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	OMA1	Q96E52	524 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	GIMAP5	Q96F15	307 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	SGCZ	Q96LD1	299 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	SACM1L	Q9NTJ5	587 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	TAS2R9	Q9NYW1	312 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	ARMCX1	Q9P291	453 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	GPR45	Q9Y5Y3	372 aa		11.16	□□□□□ -0.62
SERF2-216	ENST00000486144	MED12	Q93074	2177 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms